Guide to the Human Genome
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Name: C1QTNF7 Sequence: fasta or formatted (296aa) NCBI GI: 206597452
Description:

C1q and tumor necrosis factor related protein 7 isoform a

Referenced in:

Complement

Other entries for this name:
alt prot [289aa] C1q and tumor necrosis factor related protein 7 isoform b
alt prot [289aa] C1q and tumor necrosis factor related protein 7 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         13           1
 C cysteine            1.7          5           1
 D aspartate           5.7         17           2
 E glutamate           6.4         19           2
 F phenylalanine       4.7         14           2
 G glycine            16.6         49           1
 H histidine           1.7          5           1
 I isoleucine          6.1         18           2
 K lysine              5.4         16           2
 L leucine             7.8         23           2
 M methionine          0.7          2           1
 N asparagine          3.7         11           1
 P proline             9.1         27           2
 Q glutamine           2.7          8           1
 R arginine            4.1         12           1
 S serine              6.1         18           1
 T threonine           4.4         13           2
 V valine              4.1         12           1
 W tryptophan          0.7          2           1
 Y tyrosine            4.1         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   C1q and tumor necrosis factor related protein 7 iso... 
C1QTNF7               0.977   C1q and tumor necrosis factor related protein 7 isof...
C1QTNF7               0.977   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF2               0.540   C1q and tumor necrosis factor related protein 2 [Hom...
C1QTNF9               0.278   C1q and tumor necrosis factor related protein 9 [Hom...
COL10A1               0.278   type X collagen alpha 1 precursor 
C1QTNF9B              0.273   C1q and tumor necrosis factor related protein 9B [Ho...
OTOL1                 0.238   hypothetical protein LOC131149 
ADIPOQ                0.237   adiponectin precursor 
COL8A2                0.223   collagen, type VIII, alpha 2 
C1QTNF5               0.207   C1q and tumor necrosis factor related protein 5 prec...
COL8A1                0.202   alpha 1 type VIII collagen precursor 
COL8A1                0.202   alpha 1 type VIII collagen precursor 
C1QB                  0.187   complement component 1, q subcomponent, B chain prec...
C1QC                  0.180   complement component 1, q subcomponent, C chain prec...
C1QC                  0.180   complement component 1, q subcomponent, C chain pre...
C1QL3                 0.172   complement component 1, q subcomponent-like 3 
C1QA                  0.167   complement component 1, q subcomponent, A chain precu...
C1QL1                 0.163   complement component 1, q subcomponent-like 1 
COL13A1               0.152   alpha 1 type XIII collagen isoform 11 
COL13A1               0.152   alpha 1 type XIII collagen isoform 8 
COL13A1               0.150   alpha 1 type XIII collagen isoform 15 
COL13A1               0.150   alpha 1 type XIII collagen isoform 13 
C1QL2                 0.148   complement component 1, q subcomponent-like 2 [Homo...
COL13A1               0.148   alpha 1 type XIII collagen isoform 12 
COL13A1               0.148   alpha 1 type XIII collagen isoform 7 
COL1A1                0.145   alpha 1 type I collagen preproprotein 
COL13A1               0.145   alpha 1 type XIII collagen isoform 20 
COL13A1               0.145   alpha 1 type XIII collagen isoform 18 
COL13A1               0.145   alpha 1 type XIII collagen isoform 17 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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