Guide to the Human Genome
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Name: PARP10 Sequence: fasta or formatted (1025aa) NCBI GI: 157738665
Description:

poly (ADP-ribose) polymerase family, member 10

Referenced in:

polyADP-Ribose Polymerase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         98           3
 C cysteine            1.7         17           2
 D aspartate           3.9         40           2
 E glutamate           9.8        100           4
 F phenylalanine       2.0         20           1
 G glycine            10.5        108           3
 H histidine           2.7         28           1
 I isoleucine          1.2         12           1
 K lysine              0.9          9           1
 L leucine            14.0        143           4
 M methionine          1.6         16           1
 N asparagine          1.1         11           2
 P proline             8.1         83           2
 Q glutamine           6.1         63           3
 R arginine            7.2         74           3
 S serine              5.6         57           2
 T threonine           4.8         49           2
 V valine              7.4         76           2
 W tryptophan          0.8          8           1
 Y tyrosine            1.3         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poly (ADP-ribose) polymerase family, member 10 [Hom... 
PARP15                0.054   poly (ADP-ribose) polymerase family, member 15 isofo...
PARP15                0.054   poly (ADP-ribose) polymerase family, member 15 isof...
PARP14                0.053   poly (ADP-ribose) polymerase family, member 14 [Hom...
TIPARP                0.042   TCDD-inducible poly(ADP-ribose) polymerase 
PARP12                0.034   poly ADP-ribose polymerase 12 
PARP11                0.032   poly (ADP-ribose) polymerase family, member 11 [Hom...
PARP9                 0.027   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.027   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.027   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.027   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.027   poly (ADP-ribose) polymerase family, member 9 isofo...
ZC3HAV1               0.019   zinc finger antiviral protein isoform 1 
COL28A1               0.010   collagen, type XXVIII precursor 
COL8A2                0.010   collagen, type VIII, alpha 2 
COL5A2                0.009   alpha 2 type V collagen preproprotein 
C16orf93              0.009   hypothetical protein LOC90835 
COL11A2               0.008   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.008   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.008   collagen, type XI, alpha 2 isoform 1 preproprotein ...
COL5A3                0.008   collagen, type V, alpha 3 preproprotein 
COL24A1               0.008   collagen, type XXIV, alpha 1 
COL11A1               0.008   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.008   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.008   alpha 1 type XI collagen isoform A preproprotein [Ho...
COL4A1                0.008   alpha 1 type IV collagen preproprotein 
COL27A1               0.008   collagen, type XXVII, alpha 1 
TNKS2                 0.008   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
COL23A1               0.008   collagen, type XXIII, alpha 1 
SFTPD                 0.007   pulmonary surfactant-associated protein D precursor ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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