Guide to the Human Genome
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Name: PARP15 Sequence: fasta or formatted (678aa) NCBI GI: 165377137
Description:

poly (ADP-ribose) polymerase family, member 15 isoform 1

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
polyADP-Ribose Polymerase Family

Other entries for this name:
alt prot [444aa] poly (ADP-ribose) polymerase family, member 15 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         53           3
 C cysteine            2.1         14           1
 D aspartate           4.9         33           2
 E glutamate           4.4         30           2
 F phenylalanine       4.7         32           2
 G glycine             6.6         45           3
 H histidine           1.9         13           1
 I isoleucine          5.6         38           3
 K lysine              6.3         43           2
 L leucine             6.8         46           2
 M methionine          2.4         16           1
 N asparagine          5.6         38           2
 P proline             5.3         36           3
 Q glutamine           3.8         26           1
 R arginine            5.0         34           3
 S serine              8.4         57           3
 T threonine           7.1         48           2
 V valine              7.7         52           2
 W tryptophan          0.9          6           1
 Y tyrosine            2.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poly (ADP-ribose) polymerase family, member 15 isof... 
PARP15                0.624   poly (ADP-ribose) polymerase family, member 15 isofo...
PARP14                0.273   poly (ADP-ribose) polymerase family, member 14 [Hom...
PARP12                0.086   poly ADP-ribose polymerase 12 
TIPARP                0.086   TCDD-inducible poly(ADP-ribose) polymerase 
PARP10                0.081   poly (ADP-ribose) polymerase family, member 10 [Hom...
PARP9                 0.074   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.074   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.074   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.074   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.074   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.074   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP11                0.073   poly (ADP-ribose) polymerase family, member 11 [Hom...
ZC3HAV1               0.058   zinc finger antiviral protein isoform 1 
H2AFY                 0.040   H2A histone family, member Y isoform 1 
H2AFY                 0.033   H2A histone family, member Y isoform 2 
H2AFY                 0.033   H2A histone family, member Y isoform 2 
H2AFY                 0.033   H2A histone family, member Y isoform 3 
TNKS2                 0.031   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
MACROD2               0.026   MACRO domain containing 2 isoform 1 
TNKS                  0.024   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
MACROD1               0.022   MACRO domain containing 1 
H2AFY2                0.020   H2A histone family, member Y2 
PARP3                 0.012   poly (ADP-ribose) polymerase family, member 3 isofo...
PARP3                 0.012   poly (ADP-ribose) polymerase family, member 3 isofo...
GDAP2                 0.010   ganglioside induced differentiation associated prot...
GDAP2                 0.010   ganglioside induced differentiation associated protei...
TTBK1                 0.004   tau tubulin kinase 1 
CUX1                  0.004   cut-like homeobox 1 isoform a 
LDB3                  0.004   LIM domain binding 3 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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