Guide to the Human Genome
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Name: PARP9 Sequence: fasta or formatted (819aa) NCBI GI: 226371714
Description:

poly (ADP-ribose) polymerase family, member 9 isoform b

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
polyADP-Ribose Polymerase Family

Other entries for this name:
alt prot [854aa] poly (ADP-ribose) polymerase family, member 9 isoform a
alt prot [854aa] poly (ADP-ribose) polymerase family, member 9 isoform a
alt mRNA [819aa] poly (ADP-ribose) polymerase family, member 9 isoform b
alt mRNA [819aa] poly (ADP-ribose) polymerase family, member 9 isoform b
alt prot [710aa] poly (ADP-ribose) polymerase family, member 9 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         56           3
 C cysteine            2.0         16           1
 D aspartate           3.2         26           2
 E glutamate           7.7         63           2
 F phenylalanine       4.5         37           2
 G glycine             5.6         46           3
 H histidine           2.8         23           2
 I isoleucine          7.0         57           2
 K lysine              7.7         63           3
 L leucine             8.5         70           2
 M methionine          2.9         24           2
 N asparagine          4.8         39           2
 P proline             4.5         37           3
 Q glutamine           6.3         52           3
 R arginine            3.3         27           1
 S serine              6.5         53           2
 T threonine           4.8         39           2
 V valine              7.4         61           2
 W tryptophan          1.3         11           1
 Y tyrosine            2.3         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poly (ADP-ribose) polymerase family, member 9 isofo... 
PARP9                 1.000   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 1.000   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.989   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.989   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.838   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP14                0.123   poly (ADP-ribose) polymerase family, member 14 [Hom...
PARP15                0.061   poly (ADP-ribose) polymerase family, member 15 isof...
PARP15                0.037   poly (ADP-ribose) polymerase family, member 15 isofo...
PARP10                0.033   poly (ADP-ribose) polymerase family, member 10 [Hom...
MACROD1               0.032   MACRO domain containing 1 
TIPARP                0.028   TCDD-inducible poly(ADP-ribose) polymerase 
ZC3HAV1               0.027   zinc finger antiviral protein isoform 1 
MACROD2               0.026   MACRO domain containing 2 isoform 1 
PARP12                0.023   poly ADP-ribose polymerase 12 
H2AFY                 0.022   H2A histone family, member Y isoform 1 
H2AFY                 0.020   H2A histone family, member Y isoform 2 
H2AFY                 0.020   H2A histone family, member Y isoform 2 
H2AFY                 0.020   H2A histone family, member Y isoform 3 
H2AFY2                0.016   H2A histone family, member Y2 
PARP11                0.016   poly (ADP-ribose) polymerase family, member 11 [Hom...
TNKS2                 0.015   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
GDAP2                 0.014   ganglioside induced differentiation associated prot...
GDAP2                 0.014   ganglioside induced differentiation associated protei...
TNKS                  0.014   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
CCDC18                0.009   sarcoma antigen NY-SAR-41 
GOLGA3                0.007   Golgi autoantigen, golgin subfamily a, 3 
MYH7                  0.006   myosin, heavy chain 7, cardiac muscle, beta 
MYH6                  0.006   myosin heavy chain 6 
NBPF10                0.006   hypothetical protein LOC100132406 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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