Guide to the Human Genome
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Name: PARP12 Sequence: fasta or formatted (701aa) NCBI GI: 12232413
Description:

poly ADP-ribose polymerase 12

Referenced in:

polyADP-Ribose Polymerase Family
Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         47           4
 C cysteine            3.7         26           1
 D aspartate           4.1         29           1
 E glutamate           4.9         34           2
 F phenylalanine       5.0         35           1
 G glycine             6.6         46           2
 H histidine           3.7         26           2
 I isoleucine          3.0         21           1
 K lysine              5.6         39           2
 L leucine             8.6         60           2
 M methionine          1.3          9           1
 N asparagine          3.7         26           1
 P proline             4.7         33           2
 Q glutamine           5.8         41           2
 R arginine            5.7         40           3
 S serine              9.4         66           4
 T threonine           5.1         36           2
 V valine              6.6         46           2
 W tryptophan          1.9         13           1
 Y tyrosine            4.0         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poly ADP-ribose polymerase 12 
ZC3HAV1               0.186   zinc finger antiviral protein isoform 1 
PARP11                0.136   poly (ADP-ribose) polymerase family, member 11 [Hom...
TIPARP                0.123   TCDD-inducible poly(ADP-ribose) polymerase 
ZC3HAV1               0.099   zinc finger antiviral protein isoform 2 
PARP15                0.080   poly (ADP-ribose) polymerase family, member 15 isofo...
PARP15                0.080   poly (ADP-ribose) polymerase family, member 15 isof...
ZC3HAV1L              0.079   zinc finger CCCH-type, antiviral 1-like 
PARP14                0.072   poly (ADP-ribose) polymerase family, member 14 [Hom...
PARP10                0.047   poly (ADP-ribose) polymerase family, member 10 [Hom...
TNKS2                 0.026   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
PARP9                 0.026   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.026   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.026   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.026   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.026   poly (ADP-ribose) polymerase family, member 9 isofo...
TNKS                  0.021   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
CPSF4L                0.013   cleavage and polyadenylation specific factor 4-like...
MKRN1                 0.009   makorin ring finger protein 1 isoform 2 
MKRN1                 0.009   makorin ring finger protein 1 isoform 1 
DHX57                 0.009   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
MKRN3                 0.008   makorin ring finger protein 3 
ZC3H3                 0.008   zinc finger CCCH-type containing 3 
ZC3H6                 0.008   zinc finger CCCH-type domain containing 6 
CPSF4                 0.007   cleavage and polyadenylation specific factor 4, 30k...
CPSF4                 0.007   cleavage and polyadenylation specific factor 4, 30kDa...
MKRN2                 0.007   makorin ring finger protein 2 
NUPL2                 0.006   nucleoporin like 2 
ZC3H15                0.006   erythropoietin 4 immediate early response 
ZC3H4                 0.006   zinc finger CCCH-type containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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