Guide to the Human Genome
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Name: TNKS2 Sequence: fasta or formatted (1166aa) NCBI GI: 13376842
Description:

tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2

Referenced in:

Ankyrin Family
polyADP-Ribose Polymerase Family
Telomere Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2        119           3
 C cysteine            2.5         29           1
 D aspartate           5.1         60           2
 E glutamate           6.2         72           3
 F phenylalanine       2.2         26           1
 G glycine             8.1         95           3
 H histidine           4.9         57           2
 I isoleucine          3.3         39           2
 K lysine              6.0         70           2
 L leucine            11.6        135           3
 M methionine          1.4         16           2
 N asparagine          5.1         60           2
 P proline             4.1         48           2
 Q glutamine           3.7         43           2
 R arginine            4.6         54           2
 S serine              6.3         74           3
 T threonine           4.3         50           1
 V valine              6.8         79           3
 W tryptophan          0.4          5           1
 Y tyrosine            3.0         35           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 
TNKS                  0.829   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANK3                  0.128   ankyrin 3 isoform 1 
ANK2                  0.121   ankyrin 2 isoform 3 
ANK2                  0.121   ankyrin 2 isoform 2 
ANK2                  0.121   ankyrin 2 isoform 1 
ANK1                  0.119   ankyrin 1 isoform 9 
ANK1                  0.119   ankyrin 1 isoform 1 
ANK1                  0.119   ankyrin 1 isoform 3 
ANK1                  0.119   ankyrin 1 isoform 2 
ANK1                  0.119   ankyrin 1 isoform 4 
ANKRD28               0.096   ankyrin repeat domain 28 
ANKRD44               0.090   ankyrin repeat domain 44 
ANKRD52               0.080   ankyrin repeat domain 52 
ANKRD17               0.078   ankyrin repeat domain protein 17 isoform b 
ANKRD50               0.075   ankyrin repeat domain 50 
ANKK1                 0.060   ankyrin repeat and kinase domain containing 1 
ANKRD17               0.060   ankyrin repeat domain protein 17 isoform a 
ANKHD1                0.057   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.057   ANKHD1-EIF4EBP3 protein 
ANKHD1                0.050   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.050   ankyrin repeat and KH domain containing 1 isoform 2 ...
INVS                  0.049   inversin isoform a 
INVS                  0.049   inversin isoform b 
TANC2                 0.048   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKFY1                0.048   ankyrin repeat and FYVE domain containing 1 isoform...
RIPK4                 0.045   ankyrin repeat domain 3 
ANKRD27               0.045   ankyrin repeat domain 27 (VPS9 domain) 
TRPA1                 0.045   ankyrin-like protein 1 
LOC441869             0.044   hypothetical protein LOC441869 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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