Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PARP11 Sequence: fasta or formatted (338aa) NCBI GI: 194328777
Description:

poly (ADP-ribose) polymerase family, member 11

Referenced in:

polyADP-Ribose Polymerase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         16           2
 C cysteine            2.4          8           1
 D aspartate           6.2         21           2
 E glutamate           5.6         19           2
 F phenylalanine       7.4         25           2
 G glycine             4.7         16           1
 H histidine           3.6         12           1
 I isoleucine          6.8         23           1
 K lysine              7.1         24           3
 L leucine             5.0         17           1
 M methionine          3.3         11           1
 N asparagine          6.5         22           2
 P proline             4.1         14           2
 Q glutamine           5.0         17           2
 R arginine            4.4         15           1
 S serine              7.1         24           2
 T threonine           5.3         18           2
 V valine              4.1         14           2
 W tryptophan          2.4          8           1
 Y tyrosine            4.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poly (ADP-ribose) polymerase family, member 11 [Hom... 
PARP12                0.283   poly ADP-ribose polymerase 12 
ZC3HAV1               0.178   zinc finger antiviral protein isoform 1 
TIPARP                0.163   TCDD-inducible poly(ADP-ribose) polymerase 
PARP15                0.142   poly (ADP-ribose) polymerase family, member 15 isofo...
PARP15                0.142   poly (ADP-ribose) polymerase family, member 15 isof...
PARP14                0.133   poly (ADP-ribose) polymerase family, member 14 [Hom...
PARP10                0.092   poly (ADP-ribose) polymerase family, member 10 [Hom...
TNKS2                 0.056   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS                  0.053   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
PARP9                 0.038   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.038   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.038   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.038   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.038   poly (ADP-ribose) polymerase family, member 9 isofo...
ZC3HAV1               0.027   zinc finger antiviral protein isoform 2 
HUWE1                 0.016   HECT, UBA and WWE domain containing 1 
PARP3                 0.013   poly (ADP-ribose) polymerase family, member 3 isofo...
PARP3                 0.013   poly (ADP-ribose) polymerase family, member 3 isofo...
MITD1                 0.012   MIT, microtubule interacting and transport, domain c...
TEKT5                 0.012   tektin 5 
PARP2                 0.010   poly (ADP-ribose) polymerase family, member 2 isofo...
PARP2                 0.010   poly (ADP-ribose) polymerase family, member 2 isofo...
DTX4                  0.009   deltex 4 homolog 
USP39                 0.006   ubiquitin specific protease 39 
NRK                   0.006   Nik related kinase 
UNC5D                 0.006   unc-5 homolog D 
PION                  0.004   pigeon homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press