Guide to the Human Genome
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Name: PARP15 Sequence: fasta or formatted (444aa) NCBI GI: 22749259
Description:

poly (ADP-ribose) polymerase family, member 15 isoform 2

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
polyADP-Ribose Polymerase Family

Other entries for this name:
alt prot [678aa] poly (ADP-ribose) polymerase family, member 15 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         30           2
 C cysteine            2.3         10           1
 D aspartate           5.2         23           1
 E glutamate           3.8         17           2
 F phenylalanine       5.9         26           2
 G glycine             5.9         26           2
 H histidine           2.5         11           1
 I isoleucine          6.3         28           3
 K lysine              6.5         29           2
 L leucine             5.6         25           2
 M methionine          2.0          9           1
 N asparagine          6.3         28           2
 P proline             4.7         21           3
 Q glutamine           4.5         20           1
 R arginine            4.3         19           1
 S serine              7.2         32           2
 T threonine           7.9         35           2
 V valine              8.3         37           3
 W tryptophan          0.7          3           1
 Y tyrosine            3.4         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poly (ADP-ribose) polymerase family, member 15 isofo... 
PARP15                0.951   poly (ADP-ribose) polymerase family, member 15 isof...
PARP14                0.294   poly (ADP-ribose) polymerase family, member 14 [Hom...
PARP12                0.131   poly ADP-ribose polymerase 12 
TIPARP                0.131   TCDD-inducible poly(ADP-ribose) polymerase 
PARP10                0.124   poly (ADP-ribose) polymerase family, member 10 [Hom...
PARP11                0.112   poly (ADP-ribose) polymerase family, member 11 [Hom...
ZC3HAV1               0.088   zinc finger antiviral protein isoform 1 
PARP9                 0.068   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.068   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.068   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.068   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.068   poly (ADP-ribose) polymerase family, member 9 isofo...
PARP9                 0.068   poly (ADP-ribose) polymerase family, member 9 isofo...
TNKS2                 0.048   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS                  0.036   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
H2AFY                 0.034   H2A histone family, member Y isoform 1 
H2AFY                 0.031   H2A histone family, member Y isoform 2 
H2AFY                 0.031   H2A histone family, member Y isoform 2 
H2AFY                 0.031   H2A histone family, member Y isoform 3 
MACROD1               0.022   MACRO domain containing 1 
PARP3                 0.018   poly (ADP-ribose) polymerase family, member 3 isofo...
PARP3                 0.018   poly (ADP-ribose) polymerase family, member 3 isofo...
MACROD2               0.017   MACRO domain containing 2 isoform 1 
GDAP2                 0.008   ganglioside induced differentiation associated prot...
GDAP2                 0.008   ganglioside induced differentiation associated protei...
LIFR                  0.005   leukemia inhibitory factor receptor precursor 
LIFR                  0.005   leukemia inhibitory factor receptor precursor [Homo...
LOC100292879          0.005   PREDICTED: similar to fos39347_1 
LOC100290177          0.005   PREDICTED: hypothetical protein XP_002347928 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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