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Search of human proteins with 151301013
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo
sapiens]
(271 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo sa... 548 e-156
gi|25777659 CD200 receptor 1 isoform d [Homo sapiens] 372 e-103
gi|20270365 CD200 receptor 1 isoform a [Homo sapiens] 365 e-101
gi|25777657 CD200 receptor 1 isoform c [Homo sapiens] 231 7e-61
gi|25777655 CD200 receptor 1 isoform b [Homo sapiens] 223 1e-58
gi|11386199 poliovirus receptor-related 3 [Homo sapiens] 42 7e-04
gi|118572606 hemicentin 1 [Homo sapiens] 41 0.001
gi|66346706 neuronal growth regulator 1 [Homo sapiens] 39 0.006
gi|99028881 V-set domain containing T cell activation inhibitor ... 37 0.018
gi|5360210 poliovirus receptor related 2 isoform alpha precursor... 36 0.031
gi|112789532 poliovirus receptor related 2 isoform delta precurs... 36 0.031
gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapi... 35 0.091
gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo sap... 35 0.091
gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo sap... 35 0.091
gi|221316762 neurotrimin isoform 4 [Homo sapiens] 34 0.12
gi|221316757 neurotrimin isoform 3 [Homo sapiens] 34 0.12
gi|110349719 titin isoform N2-A [Homo sapiens] 34 0.12
gi|110431348 deleted in colorectal carcinoma [Homo sapiens] 34 0.12
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 34 0.12
gi|115298665 neurotrimin isoform 2 [Homo sapiens] 34 0.12
gi|7705413 neurotrimin isoform 1 [Homo sapiens] 34 0.12
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 34 0.15
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 34 0.15
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 34 0.15
gi|209413732 poliovirus receptor isoform delta [Homo sapiens] 33 0.20
gi|209413730 poliovirus receptor isoform gamma [Homo sapiens] 33 0.20
gi|209413728 poliovirus receptor isoform beta [Homo sapiens] 33 0.20
gi|209413726 poliovirus receptor isoform alpha [Homo sapiens] 33 0.20
gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens] 33 0.26
gi|7657361 contactin 6 [Homo sapiens] 33 0.34
>gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo
sapiens]
Length = 271
Score = 548 bits (1412), Expect = e-156
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 1 MSAPRLLISIIIMVSASSSSCMGGKQMTQNYSTIFAEGNISQPVLMDINAVLCCPPIALR 60
MSAPRLLISIIIMVSASSSSCMGGKQMTQNYSTIFAEGNISQPVLMDINAVLCCPPIALR
Sbjct: 1 MSAPRLLISIIIMVSASSSSCMGGKQMTQNYSTIFAEGNISQPVLMDINAVLCCPPIALR 60
Query: 61 NLIIITWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHD 120
NLIIITWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHD
Sbjct: 61 NLIIITWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHD 120
Query: 121 GYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKAVTGKPAAQISWIPEGSIL 180
GYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKAVTGKPAAQISWIPEGSIL
Sbjct: 121 GYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKAVTGKPAAQISWIPEGSIL 180
Query: 181 ATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSHLTGNKSLSVKLNSGLRTSGSPALSLLI 240
ATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSHLTGNKSLSVKLNSGLRTSGSPALSLLI
Sbjct: 181 ATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSHLTGNKSLSVKLNSGLRTSGSPALSLLI 240
Query: 241 ILYVKLSLFVVILVTTGFVFFQRINHVRKVL 271
ILYVKLSLFVVILVTTGFVFFQRINHVRKVL
Sbjct: 241 ILYVKLSLFVVILVTTGFVFFQRINHVRKVL 271
>gi|25777659 CD200 receptor 1 isoform d [Homo sapiens]
Length = 325
Score = 372 bits (956), Expect = e-103
Identities = 193/265 (72%), Positives = 211/265 (79%), Gaps = 7/265 (2%)
Query: 6 LLISIIIMVSASSSSCMGGKQMTQNYSTIFAEGNISQPVLMDINAVLCCPPIALRNLIII 65
LLI I +V+ASSS CM KQ+TQNYS + AE N S PV M NAVLCCPPIALRNLIII
Sbjct: 13 LLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIII 72
Query: 66 TWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRG 125
TWEIILRGQPSCTKAYKKETNETKETNCT ERITWVSRPDQNSDLQIR V THDGYYR
Sbjct: 73 TWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRC 132
Query: 126 IVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKAVTGKPAAQISWIPEGSILATKQE 185
I+VTPDGNFHRGYHLQVLVTPEV LFQ+RN TAVCKAV GKPAA ISWIPEG ATKQE
Sbjct: 133 IMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISWIPEGD-CATKQE 191
Query: 186 YWGNGTVTVKSTCPWEGHK-STVTCHVSHLTGNKSLSVKLNSGLRTSGSPALSLLIILYV 244
YW NGTVTVKSTC WE H STVTCHVSHLTGNKSL ++L L G+ + L I Y+
Sbjct: 192 YWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSLYIEL---LPVPGAKKSAKLYIPYI 248
Query: 245 KLSLFVVILVTTGFVFFQRINHVRK 269
L+ ++IL GF++ ++N RK
Sbjct: 249 ILT--IIILTIVGFIWLLKVNGCRK 271
>gi|20270365 CD200 receptor 1 isoform a [Homo sapiens]
Length = 348
Score = 365 bits (936), Expect = e-101
Identities = 188/255 (73%), Positives = 204/255 (80%), Gaps = 7/255 (2%)
Query: 16 ASSSSCMGGKQMTQNYSTIFAEGNISQPVLMDINAVLCCPPIALRNLIIITWEIILRGQP 75
ASSS CM KQ+TQNYS + AE N S PV M NAVLCCPPIALRNLIIITWEIILRGQP
Sbjct: 46 ASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQP 105
Query: 76 SCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDGNFH 135
SCTKAYKKETNETKETNCT ERITWVSRPDQNSDLQIR V THDGYYR I+VTPDGNFH
Sbjct: 106 SCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFH 165
Query: 136 RGYHLQVLVTPEVNLFQSRNITAVCKAVTGKPAAQISWIPEGSILATKQEYWGNGTVTVK 195
RGYHLQVLVTPEV LFQ+RN TAVCKAV GKPAA ISWIPEG ATKQEYW NGTVTVK
Sbjct: 166 RGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISWIPEGD-CATKQEYWSNGTVTVK 224
Query: 196 STCPWEGHK-STVTCHVSHLTGNKSLSVKLNSGLRTSGSPALSLLIILYVKLSLFVVILV 254
STC WE H STVTCHVSHLTGNKSL ++L L G+ + L I Y+ L+ ++IL
Sbjct: 225 STCHWEVHNVSTVTCHVSHLTGNKSLYIEL---LPVPGAKKSAKLYIPYIILT--IIILT 279
Query: 255 TTGFVFFQRINHVRK 269
GF++ ++N RK
Sbjct: 280 IVGFIWLLKVNGCRK 294
>gi|25777657 CD200 receptor 1 isoform c [Homo sapiens]
Length = 165
Score = 231 bits (588), Expect = 7e-61
Identities = 114/138 (82%), Positives = 119/138 (86%)
Query: 6 LLISIIIMVSASSSSCMGGKQMTQNYSTIFAEGNISQPVLMDINAVLCCPPIALRNLIII 65
LLI I +V+ASSS CM KQ+TQNYS + AE N S PV M NAVLCCPPIALRNLIII
Sbjct: 13 LLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIII 72
Query: 66 TWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRG 125
TWEIILRGQPSCTKAYKKETNETKETNCT ERITWVSRPDQNSDLQIR V THDGYYR
Sbjct: 73 TWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRC 132
Query: 126 IVVTPDGNFHRGYHLQVL 143
I+VTPDGNFHRGYHLQVL
Sbjct: 133 IMVTPDGNFHRGYHLQVL 150
>gi|25777655 CD200 receptor 1 isoform b [Homo sapiens]
Length = 188
Score = 223 bits (568), Expect = 1e-58
Identities = 109/128 (85%), Positives = 112/128 (87%)
Query: 16 ASSSSCMGGKQMTQNYSTIFAEGNISQPVLMDINAVLCCPPIALRNLIIITWEIILRGQP 75
ASSS CM KQ+TQNYS + AE N S PV M NAVLCCPPIALRNLIIITWEIILRGQP
Sbjct: 46 ASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQP 105
Query: 76 SCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDGNFH 135
SCTKAYKKETNETKETNCT ERITWVSRPDQNSDLQIR V THDGYYR I+VTPDGNFH
Sbjct: 106 SCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFH 165
Query: 136 RGYHLQVL 143
RGYHLQVL
Sbjct: 166 RGYHLQVL 173
>gi|11386199 poliovirus receptor-related 3 [Homo sapiens]
Length = 549
Score = 41.6 bits (96), Expect = 7e-04
Identities = 45/203 (22%), Positives = 81/203 (39%), Gaps = 21/203 (10%)
Query: 4 PRLLISIIIMVSASSSSCMGGKQMTQNYSTIFAEGNISQPVLMDINAVLCCPPIALRNLI 63
P LL+ +++ + + G + + + T N+S L+++N +
Sbjct: 38 PLLLLLFPLLLFSRLCGALAGPIIVEPHVTAVWGKNVSLKCLIEVN----------ETIT 87
Query: 64 IITWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYY 123
I+WE I G+ S T A R+ + + ++ + + + + G Y
Sbjct: 88 QISWEKI-HGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKY 146
Query: 124 RGIVVT-PDGNFHRGYHLQVLVTPEVNLFQ---------SRNITAVCKAVTGKPAAQISW 173
VT P GN + VLV P V+L + + + A+C A TGKP A I W
Sbjct: 147 ICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDW 206
Query: 174 IPEGSILATKQEYWGNGTVTVKS 196
+ + + + N T T+ S
Sbjct: 207 EGDLGEMESTTTSFPNETATIIS 229
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 40.8 bits (94), Expect = 0.001
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 112 IRPVDTTHD--GYYRGIVVTPDGNFHRGYHLQVLVTP---------EVNLFQSRNITAVC 160
+R + TT + G Y +V G + + L VLV P +V + + +++T C
Sbjct: 2442 LRLMQTTMEDAGQYTCVVRNAAGEERKIFGLSVLVPPHIVGENTLEDVKVKEKQSVTLTC 2501
Query: 161 KAVTGKPAAQISWIPEGSILATKQ-EYWGNGTVTVKSTCPWEGHKSTVTCHVSHLTGNKS 219
+ VTG P +I+W +G L + + +G ++ T H TC S G+KS
Sbjct: 2502 E-VTGNPVPEITWHKDGQPLQEDEAHHIISGGRFLQITNVQVPHTGRYTCLASSPAGHKS 2560
Query: 220 LSVKLN-------SGLRTSGSP 234
S LN +G+ + G+P
Sbjct: 2561 RSFSLNVFVSPTIAGVGSDGNP 2582
Score = 35.8 bits (81), Expect = 0.041
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP------------EVNLFQSRNIT 157
LQI V H G Y + +P G+ R + L V V+P +V + + +
Sbjct: 2535 LQITNVQVPHTGRYTCLASSPAGHKSRSFSLNVFVSPTIAGVGSDGNPEDVTVILNSPTS 2594
Query: 158 AVCKAVTGKPAAQISWIPEGSILATKQ 184
VC+A + P A I+W +G+ L + +
Sbjct: 2595 LVCEAYS-YPPATITWFKDGTPLESNR 2620
Score = 34.3 bits (77), Expect = 0.12
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
Query: 108 SDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVN----------LFQSRNIT 157
S L I T+ G Y + P G R ++L V VTP + +I
Sbjct: 3302 STLNIYGALTSDTGKYTCVATNPAGEEDRIFNLNVYVTPTIRGNKDEAEKLMTLVDTSIN 3361
Query: 158 AVCKAVTGKPAAQISWIPEG 177
C+A TG P QI+W+ G
Sbjct: 3362 IECRA-TGTPPPQINWLKNG 3380
Score = 33.9 bits (76), Expect = 0.15
Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 15/119 (12%)
Query: 73 GQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDG 132
G P T A+ K + ++ RI S LQI + G Y I +G
Sbjct: 3177 GIPPPTIAWLKNHKRIENSDSLEVRIL-----SGGSKLQIARSQHSDSGNYTCIASNMEG 3231
Query: 133 NFHRGYHLQVLVTP---------EVNLFQSRNITAVCKAVTGKPAAQISWIPEGSILAT 182
+ Y L + V P +V++ N+ VC A G P I W+ +G +A+
Sbjct: 3232 KAQKYYFLSIQVPPSVAGAEIPSDVSVLLGENVELVCNA-NGIPTPLIQWLKDGKPIAS 3289
Score = 33.1 bits (74), Expect = 0.26
Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 16/142 (11%)
Query: 107 NSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRN-------ITAV 159
N L+++ V G Y +V + G+ L V P+V + ++ +
Sbjct: 573 NLSLELKSVKFNDAGEYHCMVSSEGGSSAASVFLTVQEPPKVTVMPKNQSFTGGSEVSIM 632
Query: 160 CKAVTGKPAAQISWIPEGSILATKQEY--WGNGTVTVKSTCPWEGHKSTVTCHVSHLTGN 217
C A TG P +I+W + Y +GT+ +K+ P + C L N
Sbjct: 633 CSA-TGYPKPKIAWTVNDMFIVGSHRYRMTSDGTLFIKNAAPKDA--GIYGC----LASN 685
Query: 218 KSLSVKLNSGLRTSGSPALSLL 239
+ + K NS LR +P L ++
Sbjct: 686 SAGTDKQNSTLRYIEAPKLMVV 707
Score = 33.1 bits (74), Expect = 0.26
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 106 QNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEV-----NLFQSRNI--TA 158
+N L I+ T G Y + G R LQV V P + N+ N+ T
Sbjct: 3764 ENGFLHIQSAHVTDTGRYLCMATNAAGTDRRRIDLQVHVPPSIAPGPTNMTVIVNVQTTL 3823
Query: 159 VCKAVTGKPAAQISWIPEGSILATKQ-----EYWGNGTVTVKSTCPWEGHKSTVTCHVSH 213
C+A TG P I+W G +L Q +G++ + S P +T C V++
Sbjct: 3824 ACEA-TGIPKPSINWRKNGHLLNVDQNQNSYRLLSSGSLVIIS--PSVDDTATYECTVTN 3880
Query: 214 LTGNKSLSVKL 224
G+ +V L
Sbjct: 3881 GAGDDKRTVDL 3891
Score = 31.2 bits (69), Expect = 1.0
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAV---------C 160
+ I + G Y+ + + G Y LQV V P ++ S N+ AV C
Sbjct: 1976 IDIESAQISDAGIYKCVAINSAGATELFYSLQVHVAPSIS--GSNNMVAVVVNNPVRLEC 2033
Query: 161 KAVTGKPAAQISWIPEGS 178
+A G PA ++W+ +GS
Sbjct: 2034 EA-RGIPAPSLTWLKDGS 2050
Score = 30.0 bits (66), Expect = 2.2
Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 107 NSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEV-------NLFQSRNITAV 159
+ ++I T+ G Y + GN + L V V P++ + + +
Sbjct: 1132 SGSMKITETRTSDSGMYLCVATNIAGNVTQAVKLNVHVPPKIQRGPKHLKVQVGQRVDIP 1191
Query: 160 CKAVTGKPAAQISWIPEGSILATKQEYW---GNGTVTVKSTCPWEGHKSTVTCHVSHLTG 216
C A G P I+W GS + E+ +GT+++ P + TC +++ G
Sbjct: 1192 CNA-QGTPLPVITWSKGGSTMLVDGEHHVSNPDGTLSIDQATPSDA--GIYTCVATNIAG 1248
Query: 217 NKSLSVKLN 225
+ L+
Sbjct: 1249 TDETEITLH 1257
Score = 29.6 bits (65), Expect = 2.9
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
Query: 105 DQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP----------EVNLFQSR 154
D+ LQ++ + + G Y + V G + Y L V P +++ +
Sbjct: 2343 DEGHILQLKNIHVSDTGRYVCVAVNVAGMTDKKYDLSVHAPPSIIGNHRSPENISVVEKN 2402
Query: 155 NITAVCKAVTGKPAAQISWIPEG 177
+++ C+A +G P I+W +G
Sbjct: 2403 SVSLTCEA-SGIPLPSITWFKDG 2424
Score = 29.3 bits (64), Expect = 3.8
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP---------EVNLFQSRNITAVC 160
LQ+ +T G Y I G + + L+VL P E+++ + + C
Sbjct: 3491 LQLLKAETEDSGKYTCIASNEAGEVSKHFILKVLEPPHINGSEEHEEISVIVNNPLELTC 3550
Query: 161 KAVTGKPAAQISWIPEGSIL--ATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSHLTGN 217
A +G PA +++W+ +G L + + G G V ST E TC S G+
Sbjct: 3551 IA-SGIPAPKMTWMKDGRPLPQTDQVQTLGGGEVLRISTAQVE-DTGRYTCLASSPAGD 3607
Score = 28.1 bits (61), Expect = 8.5
Identities = 30/134 (22%), Positives = 49/134 (36%), Gaps = 21/134 (15%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP---------------EVNLFQSR 154
LQI + G Y + G + Y ++V + P EV + +
Sbjct: 2631 LQILNAQEDNAGRYSCVATNEAGEMIKHYEVKVYIPPIINKGDLWGPGLSPKEVKIKVNN 2690
Query: 155 NITAVCKAVTGKPAAQISWIPEGSILATKQ--EYWGNG-TVTVKSTCPWEGHKSTVTCHV 211
+T C+A P+A +SW +G L + NG T+ +K TC
Sbjct: 2691 TLTLECEAY-AIPSASLSWYKDGQPLKSDDHVNIAANGHTLQIKEA--QISDTGRYTCVA 2747
Query: 212 SHLTGNKSLSVKLN 225
S++ G L +N
Sbjct: 2748 SNIAGEDELDFDVN 2761
Score = 28.1 bits (61), Expect = 8.5
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCK-------A 162
LQI T G Y + G+ + ++L V V P V +S N+T V
Sbjct: 2928 LQILNTQITDIGRYVCVAENTAGSAKKYFNLNVHVPPSVIGPKSENLTVVVNNFISLTCE 2987
Query: 163 VTGKPAAQISWI 174
V+G P +SW+
Sbjct: 2988 VSGFPPPDLSWL 2999
Score = 28.1 bits (61), Expect = 8.5
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQ--------SRNITAVCK 161
L I+ + + G Y + G + +HL V V P + + S +T C
Sbjct: 3115 LHIKKAEVSDTGQYVCRAINVAGRDDKNFHLNVYVPPSIEGPEREVIVETISNPVTLTCD 3174
Query: 162 AVTGKPAAQISWI 174
A TG P I+W+
Sbjct: 3175 A-TGIPPPTIAWL 3186
>gi|66346706 neuronal growth regulator 1 [Homo sapiens]
Length = 354
Score = 38.5 bits (88), Expect = 0.006
Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEV-------NLFQSRNITAVCKA 162
LQI+ VD T DG Y V T HL V V P++ + + N+T C A
Sbjct: 103 LQIQNVDVTDDGPYTCSVQTQHTPRTMQVHLTVQVPPKIYDISNDMTVNEGTNVTLTCLA 162
Query: 163 VTGKPAAQISW 173
TGKP ISW
Sbjct: 163 -TGKPEPSISW 172
>gi|99028881 V-set domain containing T cell activation inhibitor 1
[Homo sapiens]
Length = 282
Score = 37.0 bits (84), Expect = 0.018
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 7 LISIIIMVSASSSSCMG---GKQMTQNYSTIFAEGNISQPVLMDINAVLCC---PPIALR 60
+ISIII+++ + + +G + + +T+ + GNI + + +L C P I L
Sbjct: 12 IISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGE------DGILSCTFEPDIKLS 65
Query: 61 NLIIITWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQ----NSDLQIRPVD 116
+ I+I W + G +K+ +E E + T V DQ N+ L+++ V
Sbjct: 66 D-IVIQW--LKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFA-DQVIVGNASLRLKNVQ 121
Query: 117 TTHDGYYRGIVVTP--DGNFHRGYHLQVLVTPEVNL-FQSRNITAVCKAVTGKPAAQISW 173
T G Y+ ++T GN + Y PEVN+ + + + T C+A P + W
Sbjct: 122 LTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVVW 181
>gi|5360210 poliovirus receptor related 2 isoform alpha precursor
[Homo sapiens]
Length = 479
Score = 36.2 bits (82), Expect = 0.031
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 106 QNSDLQIRPVDTTHDGYYRGIVVT-PDGNFHRGYHLQVLVTPE-------VNLFQSRNIT 157
Q++ L + + +G Y T P G+ L+V+ P+ V Q
Sbjct: 121 QDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRVIAKPKNQAEAQKVTFSQDPTTV 180
Query: 158 AVCKAVTGKPAAQISWIPEGSILATKQEYWGN--GTVTVKS--TCPWEGHKS--TVTCHV 211
A+C + G+P A+ISW+ A + + G GTVTV S T G TVTC V
Sbjct: 181 ALCISKEGRPPARISWLSSLDWEAKETQVSGTLAGTVTVTSRFTLVPSGRADGVTVTCKV 240
Query: 212 SH 213
H
Sbjct: 241 EH 242
>gi|112789532 poliovirus receptor related 2 isoform delta precursor
[Homo sapiens]
Length = 538
Score = 36.2 bits (82), Expect = 0.031
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 106 QNSDLQIRPVDTTHDGYYRGIVVT-PDGNFHRGYHLQVLVTPE-------VNLFQSRNIT 157
Q++ L + + +G Y T P G+ L+V+ P+ V Q
Sbjct: 121 QDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRVIAKPKNQAEAQKVTFSQDPTTV 180
Query: 158 AVCKAVTGKPAAQISWIPEGSILATKQEYWGN--GTVTVKS--TCPWEGHKS--TVTCHV 211
A+C + G+P A+ISW+ A + + G GTVTV S T G TVTC V
Sbjct: 181 ALCISKEGRPPARISWLSSLDWEAKETQVSGTLAGTVTVTSRFTLVPSGRADGVTVTCKV 240
Query: 212 SH 213
H
Sbjct: 241 EH 242
>gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo
sapiens]
Length = 848
Score = 34.7 bits (78), Expect = 0.091
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 25/157 (15%)
Query: 34 IFAEGNISQPVLMDINAVLCCPPI--ALRNLI--------IITWEIILRGQPSCTKAYKK 83
I A G I+ DI ++ PP A +N++ +T G P T ++ K
Sbjct: 193 ILARGEIN---FKDIQVIVNVPPTIQARQNIVNATANLGQSVTLVCDAEGFPEPTMSWTK 249
Query: 84 ETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVL 143
+ + ++ + I D +S L I+ VD + Y I G HL+V
Sbjct: 250 DGEQIEQEEDDEKYIF----SDDSSQLTIKKVDKNDEAEYICIAENKAGEQDATIHLKVF 305
Query: 144 VTPEVNLFQSR-------NITAVCKAVTGKPAAQISW 173
P++ +++ +T C+A +G P I+W
Sbjct: 306 AKPKITYVENQTAMELEEQVTLTCEA-SGDPIPSITW 341
Score = 28.9 bits (63), Expect = 5.0
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 107 NSDLQIRPVDTTHDGYYR---GIVVTPDGNFHRGYHLQVLVTPEVNLFQS---------R 154
N+ LQIR + T +G YR I+ + NF + + V V P + Q+ +
Sbjct: 171 NNYLQIRGIKKTDEGTYRCEGRILARGEINF-KDIQVIVNVPPTIQARQNIVNATANLGQ 229
Query: 155 NITAVCKAVTGKPAAQISWIPEGSILATKQE 185
++T VC A G P +SW +G + +++
Sbjct: 230 SVTLVCDA-EGFPEPTMSWTKDGEQIEQEED 259
Score = 28.9 bits (63), Expect = 5.0
Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 7/114 (6%)
Query: 73 GQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDG 132
G P + ++ T T++ V + S L ++ + T G Y G
Sbjct: 333 GDPIPSITWRTSTRNISSEEKTLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIG 392
Query: 133 NFHRGYHLQVLVTPE------VNLFQSRNITAVCKAVTGKPAAQISWIPEGSIL 180
+ +L+V P+ V ++ + C+ V P+A ISW +G +L
Sbjct: 393 QDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCE-VFAYPSATISWFRDGQLL 445
>gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo
sapiens]
Length = 858
Score = 34.7 bits (78), Expect = 0.091
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 25/157 (15%)
Query: 34 IFAEGNISQPVLMDINAVLCCPPI--ALRNLI--------IITWEIILRGQPSCTKAYKK 83
I A G I+ DI ++ PP A +N++ +T G P T ++ K
Sbjct: 193 ILARGEIN---FKDIQVIVNVPPTIQARQNIVNATANLGQSVTLVCDAEGFPEPTMSWTK 249
Query: 84 ETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVL 143
+ + ++ + I D +S L I+ VD + Y I G HL+V
Sbjct: 250 DGEQIEQEEDDEKYIF----SDDSSQLTIKKVDKNDEAEYICIAENKAGEQDATIHLKVF 305
Query: 144 VTPEVNLFQSR-------NITAVCKAVTGKPAAQISW 173
P++ +++ +T C+A +G P I+W
Sbjct: 306 AKPKITYVENQTAMELEEQVTLTCEA-SGDPIPSITW 341
Score = 30.0 bits (66), Expect = 2.2
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 15/124 (12%)
Query: 65 ITWEIILRGQPSCTKAY--KKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGY 122
ITW R S KA + E ET + + V VS L ++ + T G
Sbjct: 339 ITWRTSTRNISSEEKASWTRPEKQETLDGHMVVRSHARVS------SLTLKSIQYTDAGE 392
Query: 123 YRGIVVTPDGNFHRGYHLQVLVTPE------VNLFQSRNITAVCKAVTGKPAAQISWIPE 176
Y G + +L+V P+ V ++ + C+ V P+A ISW +
Sbjct: 393 YICTASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCE-VFAYPSATISWFRD 451
Query: 177 GSIL 180
G +L
Sbjct: 452 GQLL 455
Score = 28.9 bits (63), Expect = 5.0
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 107 NSDLQIRPVDTTHDGYYR---GIVVTPDGNFHRGYHLQVLVTPEVNLFQS---------R 154
N+ LQIR + T +G YR I+ + NF + + V V P + Q+ +
Sbjct: 171 NNYLQIRGIKKTDEGTYRCEGRILARGEINF-KDIQVIVNVPPTIQARQNIVNATANLGQ 229
Query: 155 NITAVCKAVTGKPAAQISWIPEGSILATKQE 185
++T VC A G P +SW +G + +++
Sbjct: 230 SVTLVCDA-EGFPEPTMSWTKDGEQIEQEED 259
>gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo
sapiens]
Length = 761
Score = 34.7 bits (78), Expect = 0.091
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 25/157 (15%)
Query: 34 IFAEGNISQPVLMDINAVLCCPPI--ALRNLI--------IITWEIILRGQPSCTKAYKK 83
I A G I+ DI ++ PP A +N++ +T G P T ++ K
Sbjct: 193 ILARGEIN---FKDIQVIVNVPPTIQARQNIVNATANLGQSVTLVCDAEGFPEPTMSWTK 249
Query: 84 ETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVL 143
+ + ++ + I D +S L I+ VD + Y I G HL+V
Sbjct: 250 DGEQIEQEEDDEKYIF----SDDSSQLTIKKVDKNDEAEYICIAENKAGEQDATIHLKVF 305
Query: 144 VTPEVNLFQSR-------NITAVCKAVTGKPAAQISW 173
P++ +++ +T C+A +G P I+W
Sbjct: 306 AKPKITYVENQTAMELEEQVTLTCEA-SGDPIPSITW 341
Score = 28.9 bits (63), Expect = 5.0
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 107 NSDLQIRPVDTTHDGYYR---GIVVTPDGNFHRGYHLQVLVTPEVNLFQS---------R 154
N+ LQIR + T +G YR I+ + NF + + V V P + Q+ +
Sbjct: 171 NNYLQIRGIKKTDEGTYRCEGRILARGEINF-KDIQVIVNVPPTIQARQNIVNATANLGQ 229
Query: 155 NITAVCKAVTGKPAAQISWIPEGSILATKQE 185
++T VC A G P +SW +G + +++
Sbjct: 230 SVTLVCDA-EGFPEPTMSWTKDGEQIEQEED 259
Score = 28.9 bits (63), Expect = 5.0
Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 7/114 (6%)
Query: 73 GQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDG 132
G P + ++ T T++ V + S L ++ + T G Y G
Sbjct: 333 GDPIPSITWRTSTRNISSEEKTLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIG 392
Query: 133 NFHRGYHLQVLVTPE------VNLFQSRNITAVCKAVTGKPAAQISWIPEGSIL 180
+ +L+V P+ V ++ + C+ V P+A ISW +G +L
Sbjct: 393 QDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCE-VFAYPSATISWFRDGQLL 445
>gi|221316762 neurotrimin isoform 4 [Homo sapiens]
Length = 316
Score = 34.3 bits (77), Expect = 0.12
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 93 CTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP------ 146
C R+ +S ++I+ VD +G Y V T + HL V V+P
Sbjct: 83 CLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEIS 142
Query: 147 -EVNLFQSRNITAVCKAVTGKPAAQISW 173
++++ + NI+ C A TG+P ++W
Sbjct: 143 SDISINEGNNISLTCIA-TGRPEPTVTW 169
>gi|221316757 neurotrimin isoform 3 [Homo sapiens]
Length = 355
Score = 34.3 bits (77), Expect = 0.12
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 93 CTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP------ 146
C R+ +S ++I+ VD +G Y V T + HL V V+P
Sbjct: 83 CLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEIS 142
Query: 147 -EVNLFQSRNITAVCKAVTGKPAAQISW 173
++++ + NI+ C A TG+P ++W
Sbjct: 143 SDISINEGNNISLTCIA-TGRPEPTVTW 169
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 34.3 bits (77), Expect = 0.12
Identities = 41/175 (23%), Positives = 67/175 (38%), Gaps = 25/175 (14%)
Query: 66 TWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRG 125
T E + G P + + K+ E N +I++ ++ + + P D+ G Y
Sbjct: 7604 TLECTVAGTPELSTKWFKDGKELTSDN--KYKISFFNKVSGLKIINVAPSDS---GVYSF 7658
Query: 126 IVVTPDGNFHRGYHLQV---LVTP-------EVNLFQSRNITAVCKAVTGKPAAQISWIP 175
V P G LQV V P E N ++ CK V G P +SW
Sbjct: 7659 EVQNPVGKDSCTASLQVSDRTVPPSFTRKLKETNGLSGSSVVMECK-VYGSPPISVSWFH 7717
Query: 176 EGSILATKQEYWGNGTVTVKSTCPW------EGHKSTVTCHVSHLTGNKSLSVKL 224
EG+ +++ ++Y T +TC E TC +++ G+ S L
Sbjct: 7718 EGNEISSGRKY---QTTLTDNTCALTVNMLEESDSGDYTCIATNMAGSDECSAPL 7769
Score = 32.0 bits (71), Expect = 0.59
Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 65 ITWEIILRGQPSCTKAYKKETNE-TKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYY 123
+T+ I++G P + ++ K ++E C V S D ++L++ VDT+ G Y
Sbjct: 7792 VTFTSIVKGTPPFSVSWFKGSSELVPGDRCNV------SLEDSVAELELFDVDTSQSGEY 7845
Query: 124 RGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCK--------AVTGKPAAQISWIP 175
IV G HL + + N ++ K TG P ++W
Sbjct: 7846 TCIVSNEAGKASCTTHL--YIKAPAKFVKRLNDYSIEKGKPLILEGTFTGTPPISVTWKK 7903
Query: 176 EGSILATKQEYWGNGTVTVKSTCPWEGHKSTV------TCHVSHLTGNKSLSVKL 224
G + Q N T T KS E STV C++ + +G S S ++
Sbjct: 7904 NGINVTPSQRC--NITTTEKSAI-LEIPSSTVEDAGQYNCYIENASGKDSCSAQI 7955
Score = 30.4 bits (67), Expect = 1.7
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 15/120 (12%)
Query: 66 TWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRG 125
T++ + G P + + K+ E + ++S D + LQIR VD H G Y
Sbjct: 5066 TFQSTVAGSPPISITWLKDDQILDEDDNV-----YISFVDSVATLQIRSVDNGHSGRYTC 5120
Query: 126 IVVTPDGNFHRGYHLQVLVTP--------EVNLFQSRNITAVCKAVTGKPAAQISWIPEG 177
G R Y ++ P V++ + +T C V G P ++ W+ +G
Sbjct: 5121 QAKNESG-VERCYAFLLVQEPAQIVEKAKSVDVTEKDPMTLEC-VVAGTPELKVKWLKDG 5178
Score = 28.9 bits (63), Expect = 5.0
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 145 TPEVNLFQSRNITAVCKAVTGKPAAQISWIPEGSILATKQEY---WGNGTVTVKSTCPWE 201
+P + L ++ T C+ +TG P ++SW +G+ + Q++ + +G T + +
Sbjct: 4868 SPVLVLRNGQSTTFECQ-ITGTPKIRVSWYLDGNEITAIQKHGISFIDGLATFQISGARV 4926
Query: 202 GHKSTVTCHVSHLTGNKSLSVKL 224
+ T C + G S S++L
Sbjct: 4927 ENSGTYVCEARNDAGTASCSIEL 4949
Score = 28.5 bits (62), Expect = 6.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 141 QVLVTPEVNLFQSRNITAVCKAVTGKPAAQISWIPEGSILAT 182
QVL + QS C ++G+P +ISW E +L+T
Sbjct: 3240 QVLQELQPVTVQSGKPARFCAVISGRPQPKISWYKEEQLLST 3281
Score = 28.5 bits (62), Expect = 6.5
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 11/118 (9%)
Query: 109 DLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKA------ 162
+L I D + G Y+ IV G+ + L P + + N T V K+
Sbjct: 5011 NLHITKCDPSDTGEYQCIVSNEGGSCSCSTRV-ALKEPPSFIKKIENTTTVLKSSATFQS 5069
Query: 163 -VTGKPAAQISWIPEGSILATKQEYW---GNGTVTVKSTCPWEGHKSTVTCHVSHLTG 216
V G P I+W+ + IL + + T++ GH TC + +G
Sbjct: 5070 TVAGSPPISITWLKDDQILDEDDNVYISFVDSVATLQIRSVDNGHSGRYTCQAKNESG 5127
>gi|110431348 deleted in colorectal carcinoma [Homo sapiens]
Length = 1447
Score = 34.3 bits (77), Expect = 0.12
Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 108 SDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP-------EVNLFQSRNITAVC 160
S+L I V G Y +V + N L VLV P + ++S +I C
Sbjct: 293 SNLLISNVTDDDSGMYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFEC 352
Query: 161 KAVTGKPAAQISWIPEGSILATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSHLTGNKSL 220
V+GKP ++W+ G ++ + G ++ + + C + GN
Sbjct: 353 -TVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQT 411
Query: 221 SVKL 224
S +L
Sbjct: 412 SAQL 415
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/126 (25%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNI-------TAVCKA 162
LQ+ D G+Y + G+ + Y+L V V P L +S + T++
Sbjct: 2126 LQVDRADVWDAGHYTCEALNQAGHSEKHYNLNVWVAPVFPLRESHTLTVREGHPTSLSCE 2185
Query: 163 VTGKPAAQISWIPEGSIL----ATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSHLTGNK 218
G P +ISW +G L A Q G + + T TC S++ GN
Sbjct: 2186 CRGVPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQAQL-AQEGTYTCECSNVVGNS 2244
Query: 219 SLSVKL 224
S ++L
Sbjct: 2245 SQDLQL 2250
Score = 33.9 bits (76), Expect = 0.15
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 109 DLQIRPVDTTH---DGYYRGIVVTPDGNFHRGYHLQVLVTP---------EVNLFQSRNI 156
D Q+ + +H +G Y+ + +P G R + L+V P EV + + +
Sbjct: 1461 DGQVLRITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAPPTIWGSNETGEVAVMEDHLV 1520
Query: 157 TAVCKAVTGKPAAQISWIPEGSILATKQE-YWGNGTVTVKSTCPWEGHKSTVTCHVSHLT 215
+C+A G P I+W +G++L T + + G ++ TC S+
Sbjct: 1521 QLLCEA-RGVPTPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAGVYTCKASNAV 1579
Query: 216 GNKSLSVKLN 225
G + +L+
Sbjct: 1580 GAAEKATRLD 1589
Score = 33.9 bits (76), Expect = 0.15
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 21/141 (14%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVN-------LFQSRNITAVCKA 162
LQI VD +G Y G R L+VLV P + + ++ ++T C A
Sbjct: 1850 LQIEKVDLRDEGIYTCAATNLAGESKREVALKVLVPPNIEPGPVNKAVLENASVTLECLA 1909
Query: 163 VTGKPAAQISWIPEGSILATKQEYWGNGTVTVKSTC-----PWEGHKSTVTCHVSHLTGN 217
+G P +SW +++ W TV+V + C S++ G
Sbjct: 1910 -SGVPPPDVSWFKGHQPVSS----WMGVTVSVDGRVLRIEQAQLSDAGSYRCVASNVAG- 1963
Query: 218 KSLSVKLNSGLRTSGSPALSL 238
S +L GLR + P ++L
Sbjct: 1964 ---STELRYGLRVNVPPRITL 1981
Score = 33.1 bits (74), Expect = 0.26
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 119 HDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNIT------AVCKAVTGKPAAQIS 172
H G Y + G+ HR L V V P ++ + +IT ++ +G PA I+
Sbjct: 949 HAGRYSCVATNTAGSQHRDVELVVQVPPRIHPTATHHITNEGVPASLPCVASGVPAPTIT 1008
Query: 173 WIPEGSILATKQEYWG---NGTVTVKSTCPWEGHKSTVTCHVSHLTGNKSLSVKLN 225
W E + L ++ ++ GT+ + P C ++ G S ++L+
Sbjct: 1009 WTKETNALTSRGPHYNVSKEGTLLIAQ--PSAQDAGAYVCTATNTVGFSSQEMRLS 1062
Score = 32.7 bits (73), Expect = 0.34
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 105 DQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEV--NLFQSRNITA---- 158
+Q L + H G Y + G R + L VLV PE+ +L NITA
Sbjct: 2309 NQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHS 2368
Query: 159 ----VCKAVTGKPAAQISWI-PEGSILATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSH 213
+C+A+ G P I W E + + Y G +K T E +C S+
Sbjct: 2369 PLTLLCEAM-GIPPPAIRWFRGEEPVSPGEDTYLLAGGWMLKMTQTQEQDSGLYSCLASN 2427
Query: 214 LTG 216
G
Sbjct: 2428 EAG 2430
Score = 30.8 bits (68), Expect = 1.3
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 105 DQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP---------EVNLFQSRN 155
+Q LQ+ V G Y + V+ G R + L V+ P E++L
Sbjct: 3453 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPHIEDSGQPTELSLTPGAP 3512
Query: 156 ITAVCKAVTGKPAAQISWIPEGSIL 180
+ +C A G P I+W +G L
Sbjct: 3513 MELLCDA-QGTPQPNITWHKDGQAL 3536
Score = 30.0 bits (66), Expect = 2.2
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKA------- 162
L+I V G + + +P G R + LQV V P + + +N V +
Sbjct: 3369 LRISKVQLADAGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPC 3428
Query: 163 -VTGKPAAQISWIPEGSILATK 183
G P +SW+ +G L ++
Sbjct: 3429 EARGVPLPLVSWMKDGEPLLSQ 3450
Score = 29.3 bits (64), Expect = 3.8
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 107 NSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEV-------NLFQSRNITAV 159
+ L++ V G+Y P G+ Y L V V P+V + +
Sbjct: 1081 SGSLRLAQVQVGDSGHYECTASNPAGSASHRYVLGVQVPPQVQPGPRVLKVLVGEALDLN 1140
Query: 160 CKAVTGKPAAQISWIPEGSIL 180
C A G P Q+SW +G +L
Sbjct: 1141 CVA-EGNPEPQLSWSKDGVVL 1160
Score = 28.9 bits (63), Expect = 5.0
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 13/81 (16%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP------------EVNLFQSRNIT 157
LQ+ + + G+Y I G + + L VL+ P EV + + I+
Sbjct: 2501 LQVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTVTVNNPIS 2560
Query: 158 AVCKAVTGKPAAQISWIPEGS 178
+C+A+ P+ I+W+ +G+
Sbjct: 2561 LICEAL-AFPSPNITWMKDGA 2580
Score = 28.5 bits (62), Expect = 6.5
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKA------- 162
L++ G Y + G R + ++VLV P + + V
Sbjct: 2408 LKMTQTQEQDSGLYSCLASNEAGEARRNFSVEVLVPPSIENEDLEEVIKVLDGQTAHLMC 2467
Query: 163 -VTGKPAAQISWIPEGSILA 181
VTG P +++W +G LA
Sbjct: 2468 NVTGHPQPKLTWFKDGRPLA 2487
>gi|115298665 neurotrimin isoform 2 [Homo sapiens]
Length = 344
Score = 34.3 bits (77), Expect = 0.12
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 93 CTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP------ 146
C R+ +S ++I+ VD +G Y V T + HL V V+P
Sbjct: 83 CLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEIS 142
Query: 147 -EVNLFQSRNITAVCKAVTGKPAAQISW 173
++++ + NI+ C A TG+P ++W
Sbjct: 143 SDISINEGNNISLTCIA-TGRPEPTVTW 169
>gi|7705413 neurotrimin isoform 1 [Homo sapiens]
Length = 344
Score = 34.3 bits (77), Expect = 0.12
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 93 CTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP------ 146
C R+ +S ++I+ VD +G Y V T + HL V V+P
Sbjct: 83 CLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEIS 142
Query: 147 -EVNLFQSRNITAVCKAVTGKPAAQISW 173
++++ + NI+ C A TG+P ++W
Sbjct: 143 SDISINEGNNISLTCIA-TGRPEPTVTW 169
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 33.9 bits (76), Expect = 0.15
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 109 DLQIRPVDTTH---DGYYRGIVVTPDGNFHRGYHLQVLVTP---------EVNLFQSRNI 156
D Q+ + +H +G Y+ + +P G R + L+V P EV + + +
Sbjct: 270 DGQVLRITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAPPTIWGSNETGEVAVMEDHLV 329
Query: 157 TAVCKAVTGKPAAQISWIPEGSILATKQE-YWGNGTVTVKSTCPWEGHKSTVTCHVSHLT 215
+C+A G P I+W +G++L T + + G ++ TC S+
Sbjct: 330 QLLCEA-RGVPTPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAGVYTCKASNAV 388
Query: 216 GNKSLSVKLN 225
G + +L+
Sbjct: 389 GAAEKATRLD 398
Score = 33.9 bits (76), Expect = 0.15
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 21/141 (14%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVN-------LFQSRNITAVCKA 162
LQI VD +G Y G R L+VLV P + + ++ ++T C A
Sbjct: 659 LQIEKVDLRDEGIYTCAATNLAGESKREVALKVLVPPNIEPGPVNKAVLENASVTLECLA 718
Query: 163 VTGKPAAQISWIPEGSILATKQEYWGNGTVTVKSTC-----PWEGHKSTVTCHVSHLTGN 217
+G P +SW +++ W TV+V + C S++ G
Sbjct: 719 -SGVPPPDVSWFKGHQPVSS----WMGVTVSVDGRVLRIEQAQLSDAGSYRCVASNVAG- 772
Query: 218 KSLSVKLNSGLRTSGSPALSL 238
S +L GLR + P ++L
Sbjct: 773 ---STELRYGLRVNVPPRITL 790
Score = 33.9 bits (76), Expect = 0.15
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 12/126 (9%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNI-------TAVCKA 162
LQ+ D G+Y + G + Y+L V V P L +S + T++
Sbjct: 935 LQVDRADVWDAGHYTCEALNQAGRSEKHYNLNVWVAPVFPLRESHTLTVREGHPTSLSCE 994
Query: 163 VTGKPAAQISWIPEGSIL----ATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSHLTGNK 218
G P +ISW +G L A Q G + + T TC S++ GN
Sbjct: 995 CRGVPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQAQL-AQEGTYTCECSNVVGNS 1053
Query: 219 SLSVKL 224
S ++L
Sbjct: 1054 SQDLQL 1059
Score = 32.7 bits (73), Expect = 0.34
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 105 DQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEV--NLFQSRNITA---- 158
+Q L + H G Y + G R + L VLV PE+ +L NITA
Sbjct: 1118 NQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHS 1177
Query: 159 ----VCKAVTGKPAAQISWI-PEGSILATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSH 213
+C+A+ G P I W E + + Y G +K T E +C S+
Sbjct: 1178 PLTLLCEAM-GIPPPAIRWFRGEEPVSPGEDTYLLAGGWMLKMTQTQEQDSGLYSCLASN 1236
Query: 214 LTG 216
G
Sbjct: 1237 EAG 1239
Score = 30.8 bits (68), Expect = 1.3
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 105 DQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP---------EVNLFQSRN 155
+Q LQ+ V G Y + V+ G R + L V+ P E++L
Sbjct: 2262 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPHIEDSGQPTELSLTPGAP 2321
Query: 156 ITAVCKAVTGKPAAQISWIPEGSIL 180
+ +C A G P I+W +G L
Sbjct: 2322 MELLCDA-QGTPQPNITWHKDGQAL 2345
Score = 30.0 bits (66), Expect = 2.2
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKA------- 162
L+I V G + + +P G R + LQV V P + + +N V +
Sbjct: 2178 LRISKVQLADAGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPC 2237
Query: 163 -VTGKPAAQISWIPEGSILATK 183
G P +SW+ +G L ++
Sbjct: 2238 EARGVPLPLVSWMKDGEPLLSQ 2259
Score = 28.9 bits (63), Expect = 5.0
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 13/81 (16%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP------------EVNLFQSRNIT 157
LQ+ + + G+Y I G + + L VL+ P EV + + I+
Sbjct: 1310 LQVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTVTVNNPIS 1369
Query: 158 AVCKAVTGKPAAQISWIPEGS 178
+C+A+ P+ I+W+ +G+
Sbjct: 1370 LICEAL-AFPSPNITWMKDGA 1389
Score = 28.5 bits (62), Expect = 6.5
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKA------- 162
L++ G Y + G R + ++VLV P + + V
Sbjct: 1217 LKMTQTQEQDSGLYSCLASNEAGEARRNFSVEVLVPPSIENEDLEEVIKVLDGQTAHLMC 1276
Query: 163 -VTGKPAAQISWIPEGSILA 181
VTG P +++W +G LA
Sbjct: 1277 NVTGHPQPKLTWFKDGRPLA 1296
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 33.9 bits (76), Expect = 0.15
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 109 DLQIRPVDTTH---DGYYRGIVVTPDGNFHRGYHLQVLVTP---------EVNLFQSRNI 156
D Q+ + +H +G Y+ + +P G R + L+V P EV + + +
Sbjct: 179 DGQVLRITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAPPTIWGSNETGEVAVMEDHLV 238
Query: 157 TAVCKAVTGKPAAQISWIPEGSILATKQE-YWGNGTVTVKSTCPWEGHKSTVTCHVSHLT 215
+C+A G P I+W +G++L T + + G ++ TC S+
Sbjct: 239 QLLCEA-RGVPTPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAGVYTCKASNAV 297
Query: 216 GNKSLSVKLN 225
G + +L+
Sbjct: 298 GAAEKATRLD 307
Score = 33.9 bits (76), Expect = 0.15
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 21/141 (14%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVN-------LFQSRNITAVCKA 162
LQI VD +G Y G R L+VLV P + + ++ ++T C A
Sbjct: 568 LQIEKVDLRDEGIYTCAATNLAGESKREVALKVLVPPNIEPGPVNKAVLENASVTLECLA 627
Query: 163 VTGKPAAQISWIPEGSILATKQEYWGNGTVTVKSTC-----PWEGHKSTVTCHVSHLTGN 217
+G P +SW +++ W TV+V + C S++ G
Sbjct: 628 -SGVPPPDVSWFKGHQPVSS----WMGVTVSVDGRVLRIEQAQLSDAGSYRCVASNVAG- 681
Query: 218 KSLSVKLNSGLRTSGSPALSL 238
S +L GLR + P ++L
Sbjct: 682 ---STELRYGLRVNVPPRITL 699
Score = 33.9 bits (76), Expect = 0.15
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 12/126 (9%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITA-------VCKA 162
LQ+ D G+Y + G+ + Y+L V V P L +S +T +
Sbjct: 844 LQVDRADVWDAGHYTCEALNQAGHSEKHYNLNVWVAPVFPLRESHTLTVREGHPTRLSCE 903
Query: 163 VTGKPAAQISWIPEGSIL----ATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSHLTGNK 218
G P +ISW +G L A Q G + + T TC S++ GN
Sbjct: 904 CRGVPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQAQL-AQEGTYTCECSNVVGNS 962
Query: 219 SLSVKL 224
S ++L
Sbjct: 963 SQDLQL 968
Score = 32.7 bits (73), Expect = 0.34
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 105 DQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEV--NLFQSRNITA---- 158
+Q L + H G Y + G R + L VLV PE+ +L NITA
Sbjct: 1027 NQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHS 1086
Query: 159 ----VCKAVTGKPAAQISWI-PEGSILATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSH 213
+C+A+ G P I W E + + Y G +K T E +C S+
Sbjct: 1087 PLTLLCEAM-GIPPPAIRWFRGEEPVSPGEDTYLLAGGWMLKMTQTQEQDSGLYSCLASN 1145
Query: 214 LTG 216
G
Sbjct: 1146 EAG 1148
Score = 30.8 bits (68), Expect = 1.3
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 105 DQNSDLQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP---------EVNLFQSRN 155
+Q LQ+ V G Y + V+ G R + L V+ P E++L
Sbjct: 2171 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPHIEDSGQPTELSLTPGAP 2230
Query: 156 ITAVCKAVTGKPAAQISWIPEGSIL 180
+ +C A G P I+W +G L
Sbjct: 2231 MELLCDA-QGTPQPNITWHKDGQAL 2254
Score = 30.0 bits (66), Expect = 2.2
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKA------- 162
L+I V G + + +P G R + LQV V P + + +N V +
Sbjct: 2087 LRISKVQLADAGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPC 2146
Query: 163 -VTGKPAAQISWIPEGSILATK 183
G P +SW+ +G L ++
Sbjct: 2147 EARGVPLPLVSWMKDGEPLLSQ 2168
Score = 28.9 bits (63), Expect = 5.0
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 13/81 (16%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTP------------EVNLFQSRNIT 157
LQ+ + + G+Y I G + + L VL+ P EV + + I+
Sbjct: 1219 LQVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTVTVNNPIS 1278
Query: 158 AVCKAVTGKPAAQISWIPEGS 178
+C+A+ P+ I+W+ +G+
Sbjct: 1279 LICEAL-AFPSPNITWMKDGA 1298
Score = 28.5 bits (62), Expect = 6.5
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 110 LQIRPVDTTHDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKA------- 162
L++ G Y + G R + ++VLV P + + V
Sbjct: 1126 LKMTQTQEQDSGLYSCLASNEAGEARRNFSVEVLVPPSIENEDLEEVIKVLDGQTAHLMC 1185
Query: 163 -VTGKPAAQISWIPEGSILA 181
VTG P +++W +G LA
Sbjct: 1186 NVTGHPQPKLTWFKDGRPLA 1205
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 33.9 bits (76), Expect = 0.15
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 17/123 (13%)
Query: 108 SDLQIRPVDTTHDGYYRGIVVTPD---GNFHRG--YHLQVLVTPE--------VNLFQSR 154
+ L++ V + G+Y V+ D FH G HL + P + +
Sbjct: 96 ASLRLEQVRSEDQGWYECKVLMLDQQYDTFHNGSWVHLTINAPPTFTETPPQYIEAKEGG 155
Query: 155 NITAVCKAVTGKPAAQISWIPEGSILATKQEYW-GNGTVTVKSTCPWEGHKSTVTCHVSH 213
+IT C A G P ++W+ EG++L +Y +G++TV S + TC
Sbjct: 156 SITMTCTAF-GNPKPIVTWLKEGTLLGASGKYQVSDGSLTVTSVS--REDRGAYTCRAYS 212
Query: 214 LTG 216
+ G
Sbjct: 213 IQG 215
>gi|209413732 poliovirus receptor isoform delta [Homo sapiens]
Length = 392
Score = 33.5 bits (75), Expect = 0.20
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 106 QNSDLQIRPVDTTHDGYYRGIVVT-PDGNFHRGYHLQVLVTPE-------VNLFQSRNIT 157
+N+ L++ + +G Y + VT P G+ L+VL P+ V L
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163
Query: 158 AVCKAVTGKPAAQISWIPEGSILATKQEYWG--NGTVTVKSTCPW------EGHKSTVTC 209
A C + G+P AQI+W + + + G +GTVTV S W + VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221
Query: 210 HVSHLTGNKSLSVKLN 225
V H + K + +N
Sbjct: 222 KVEHESFEKPQLLTVN 237
>gi|209413730 poliovirus receptor isoform gamma [Homo sapiens]
Length = 364
Score = 33.5 bits (75), Expect = 0.20
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 106 QNSDLQIRPVDTTHDGYYRGIVVT-PDGNFHRGYHLQVLVTPE-------VNLFQSRNIT 157
+N+ L++ + +G Y + VT P G+ L+VL P+ V L
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163
Query: 158 AVCKAVTGKPAAQISWIPEGSILATKQEYWG--NGTVTVKSTCPW------EGHKSTVTC 209
A C + G+P AQI+W + + + G +GTVTV S W + VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221
Query: 210 HVSHLTGNKSLSVKLN 225
V H + K + +N
Sbjct: 222 KVEHESFEKPQLLTVN 237
>gi|209413728 poliovirus receptor isoform beta [Homo sapiens]
Length = 372
Score = 33.5 bits (75), Expect = 0.20
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 106 QNSDLQIRPVDTTHDGYYRGIVVT-PDGNFHRGYHLQVLVTPE-------VNLFQSRNIT 157
+N+ L++ + +G Y + VT P G+ L+VL P+ V L
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163
Query: 158 AVCKAVTGKPAAQISWIPEGSILATKQEYWG--NGTVTVKSTCPW------EGHKSTVTC 209
A C + G+P AQI+W + + + G +GTVTV S W + VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221
Query: 210 HVSHLTGNKSLSVKLN 225
V H + K + +N
Sbjct: 222 KVEHESFEKPQLLTVN 237
>gi|209413726 poliovirus receptor isoform alpha [Homo sapiens]
Length = 417
Score = 33.5 bits (75), Expect = 0.20
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 106 QNSDLQIRPVDTTHDGYYRGIVVT-PDGNFHRGYHLQVLVTPE-------VNLFQSRNIT 157
+N+ L++ + +G Y + VT P G+ L+VL P+ V L
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163
Query: 158 AVCKAVTGKPAAQISWIPEGSILATKQEYWG--NGTVTVKSTCPW------EGHKSTVTC 209
A C + G+P AQI+W + + + G +GTVTV S W + VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221
Query: 210 HVSHLTGNKSLSVKLN 225
V H + K + +N
Sbjct: 222 KVEHESFEKPQLLTVN 237
>gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens]
Length = 1215
Score = 33.1 bits (74), Expect = 0.26
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 119 HDGYYRGIVVTPDGNFHRGYHLQVLVTPEVNLFQSRNIT------AVCKAVTGKPAAQIS 172
H G Y + G+ HR L V V P ++ + +IT ++ +G PA I+
Sbjct: 832 HAGRYSCVATNTAGSQHRDVELVVQVPPRIHPTATHHITNEGVPASLPCVASGVPAPTIT 891
Query: 173 WIPEGSILATKQEYWG---NGTVTVKSTCPWEGHKSTVTCHVSHLTGNKSLSVKLN 225
W E + L ++ ++ GT+ + P C ++ G S ++L+
Sbjct: 892 WTKETNALTSRGPHYNVSKEGTLLIAQ--PSAQDAGAYVCTATNTVGFSSQEMRLS 945
>gi|7657361 contactin 6 [Homo sapiens]
Length = 1028
Score = 32.7 bits (73), Expect = 0.34
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 52 LCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQ 111
LC L +L + +II+RG P E + ++ + T +++W + PD NS +Q
Sbjct: 576 LCTVQTTLESLSAVA-DIIVRGPPG-----PPEDVQVEDISSTTSQLSWRAGPDNNSPIQ 629
Query: 112 IRPVDT 117
I + T
Sbjct: 630 IFTIQT 635
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,152,446
Number of Sequences: 37866
Number of extensions: 440847
Number of successful extensions: 1373
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1150
Number of HSP's gapped (non-prelim): 255
length of query: 271
length of database: 18,247,518
effective HSP length: 101
effective length of query: 170
effective length of database: 14,423,052
effective search space: 2451918840
effective search space used: 2451918840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.