Guide to the Human Genome
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Name: CD200R1L Sequence: fasta or formatted (271aa) NCBI GI: 151301013
Description:

CD200 cell surface glycoprotein receptor 2

Referenced in:

Macrophages and Monocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         12           2
 C cysteine            3.0          8           2
 D aspartate           2.2          6           1
 E glutamate           3.7         10           1
 F phenylalanine       2.6          7           2
 G glycine             6.3         17           2
 H histidine           2.6          7           1
 I isoleucine          8.9         24           3
 K lysine              5.2         14           2
 L leucine             8.9         24           2
 M methionine          1.8          5           1
 N asparagine          5.2         14           1
 P proline             4.8         13           2
 Q glutamine           4.1         11           1
 R arginine            4.4         12           1
 S serine              9.2         25           4
 T threonine           9.2         25           2
 V valine              9.2         25           2
 W tryptophan          1.8          5           1
 Y tyrosine            2.6          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD200 cell surface glycoprotein receptor 2 
CD200R1               0.663   CD200 receptor 1 isoform d 
CD200R1               0.650   CD200 receptor 1 isoform a 
CD200R1               0.394   CD200 receptor 1 isoform c 
CD200R1               0.379   CD200 receptor 1 isoform b 
PVRL3                 0.033   poliovirus receptor-related 3 
HMCN1                 0.031   hemicentin 1 
NEGR1                 0.027   neuronal growth regulator 1 
VTCN1                 0.023   V-set domain containing T cell activation inhibitor ...
PVRL2                 0.021   poliovirus receptor related 2 isoform alpha precursor...
PVRL2                 0.021   poliovirus receptor related 2 isoform delta precurs...
NCAM1                 0.019   neural cell adhesion molecule 1 isoform 1 
NCAM1                 0.019   neural cell adhesion molecule 1 isoform 2 
NCAM1                 0.019   neural cell adhesion molecule 1 isoform 3 
NTM                   0.017   neurotrimin isoform 4 
NTM                   0.017   neurotrimin isoform 3 
TTN                   0.017   titin isoform N2-A 
DCC                   0.017   deleted in colorectal carcinoma 
HMCN2                 0.017   PREDICTED: hemicentin 2 
NTM                   0.017   neurotrimin isoform 2 
NTM                   0.017   neurotrimin isoform 1 
HMCN2                 0.017   PREDICTED: hemicentin 2 
HMCN2                 0.017   PREDICTED: hemicentin 2 
IGSF9B                0.017   immunoglobulin superfamily, member 9B 
PVR                   0.015   poliovirus receptor isoform delta 
PVR                   0.015   poliovirus receptor isoform gamma 
PVR                   0.015   poliovirus receptor isoform beta 
PVR                   0.015   poliovirus receptor isoform alpha 
LOC100292387          0.015   PREDICTED: similar to hemicentin 2 
CNTN6                 0.015   contactin 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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