Guide to the Human Genome
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Name: PVRL3 Sequence: fasta or formatted (549aa) NCBI GI: 11386199
Description:

poliovirus receptor-related 3

Referenced in:

Additional Immunoglobulin-related Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         31           2
 C cysteine            1.6          9           1
 D aspartate           6.0         33           2
 E glutamate           5.1         28           2
 F phenylalanine       3.8         21           1
 G glycine             6.6         36           3
 H histidine           2.2         12           2
 I isoleucine          6.4         35           2
 K lysine              5.5         30           2
 L leucine             9.7         53           5
 M methionine          1.1          6           1
 N asparagine          4.6         25           2
 P proline             6.9         38           3
 Q glutamine           3.6         20           2
 R arginine            4.0         22           4
 S serine              7.5         41           2
 T threonine           7.1         39           4
 V valine              7.5         41           2
 W tryptophan          1.6          9           1
 Y tyrosine            3.6         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poliovirus receptor-related 3 
PVRL1                 0.191   poliovirus receptor-related 1 isoform 1 
PVRL1                 0.167   poliovirus receptor-related 1 isoform 2 
PVRL1                 0.164   poliovirus receptor-related 1 isoform 3 
PVRL4                 0.153   poliovirus receptor-related 4 
PVRL2                 0.122   poliovirus receptor related 2 isoform delta precurs...
PVRL2                 0.120   poliovirus receptor related 2 isoform alpha precursor...
PVR                   0.110   poliovirus receptor isoform delta 
PVR                   0.110   poliovirus receptor isoform beta 
PVR                   0.110   poliovirus receptor isoform alpha 
PVR                   0.108   poliovirus receptor isoform gamma 
CADM1                 0.085   immunoglobulin superfamily, member 4D isoform 1 [Ho...
CADM1                 0.071   immunoglobulin superfamily, member 4D isoform 2 [Ho...
CADM2                 0.057   immunoglobulin superfamily, member 4D 
CADM3                 0.052   cell adhesion molecule 3 isoform 2 
CADM3                 0.050   cell adhesion molecule 3 isoform 1 
CADM4                 0.044   cell adhesion molecule 4 
CD200                 0.044   CD200 antigen isoform b 
CD200                 0.044   CD200 antigen isoform a precursor 
HSPG2                 0.035   heparan sulfate proteoglycan 2 
CD226                 0.034   CD226 molecule precursor 
HMCN1                 0.030   hemicentin 1 
DSCAM                 0.029   Down syndrome cell adhesion molecule isoform CHD2-42...
HMCN2                 0.026   PREDICTED: hemicentin 2 
HMCN2                 0.026   PREDICTED: hemicentin 2 
HMCN2                 0.026   PREDICTED: hemicentin 2 
VSIG1                 0.026   V-set and immunoglobulin domain containing 1 
MAG                   0.026   myelin associated glycoprotein isoform a precursor [...
MAG                   0.026   myelin associated glycoprotein isoform b precursor [...
KIRREL3               0.026   kin of IRRE like 3 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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