Guide to the Human Genome
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Name: CD200R1 Sequence: fasta or formatted (188aa) NCBI GI: 25777655
Description:

CD200 receptor 1 isoform b

Referenced in:

Macrophages and Monocytes

Other entries for this name:
alt prot [348aa] CD200 receptor 1 isoform a
alt prot [165aa] CD200 receptor 1 isoform c
alt prot [325aa] CD200 receptor 1 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         13           2
 C cysteine            3.7          7           2
 D aspartate           3.7          7           1
 E glutamate           5.9         11           1
 F phenylalanine       1.6          3           1
 G glycine             3.7          7           1
 H histidine           3.2          6           2
 I isoleucine          7.4         14           3
 K lysine              4.8          9           2
 L leucine            11.2         21           3
 M methionine          2.7          5           1
 N asparagine          6.4         12           2
 P proline             4.8          9           2
 Q glutamine           4.3          8           1
 R arginine            4.8          9           1
 S serine              5.9         11           3
 T threonine           9.0         17           1
 V valine              4.8          9           1
 W tryptophan          2.1          4           1
 Y tyrosine            3.2          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD200 receptor 1 isoform b 
CD200R1               0.910   CD200 receptor 1 isoform a 
CD200R1               0.841   CD200 receptor 1 isoform c 
CD200R1               0.753   CD200 receptor 1 isoform d 
CD200R1L              0.542   CD200 cell surface glycoprotein receptor 2 
RNASE8                0.027   ribonuclease, RNase A family, 8 
CNTN6                 0.022   contactin 6 
FGFR2                 0.019   fibroblast growth factor receptor 2 isoform 9 precu...
FGFR2                 0.019   fibroblast growth factor receptor 2 isoform 3 precu...
FGFR2                 0.019   fibroblast growth factor receptor 2 isoform 8 precu...
FGFR2                 0.019   fibroblast growth factor receptor 2 isoform 7 precu...
FGFR2                 0.019   fibroblast growth factor receptor 2 isoform 6 precu...
FGFR2                 0.019   fibroblast growth factor receptor 2 isoform 5 precu...
FGFR2                 0.019   fibroblast growth factor receptor 2 isoform 1 precu...
FGFR2                 0.019   fibroblast growth factor receptor 2 isoform 2 precu...
FGFR2                 0.019   fibroblast growth factor receptor 2 isoform 4 precu...
RNASE7                0.014   ribonuclease, RNase A family, 7 
HMCN1                 0.014   hemicentin 1 
PTK7                  0.014   PTK7 protein tyrosine kinase 7 isoform a precursor [...
PTK7                  0.014   PTK7 protein tyrosine kinase 7 isoform d precursor [...
MXRA5                 0.011   adlican 
IGSF10                0.011   immunoglobulin superfamily, member 10 
HMCN2                 0.011   PREDICTED: hemicentin 2 
HMCN2                 0.011   PREDICTED: hemicentin 2 
HMCN2                 0.011   PREDICTED: hemicentin 2 
DSCAM                 0.011   Down syndrome cell adhesion molecule isoform CHD2-42...
PTK7                  0.011   PTK7 protein tyrosine kinase 7 isoform b precursor [...
TEX10                 0.008   testis expressed 10 isoform 2 
TEX10                 0.008   testis expressed 10 isoform 1 
ZNF462                0.008   zinc finger protein 462 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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