| Name: NEGR1 | Sequence: fasta or formatted (354aa) | NCBI GI: 66346706 | |
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Description: neuronal growth regulator 1
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.5 23 2 C cysteine 3.4 12 2 D aspartate 5.1 18 2 E glutamate 3.4 12 1 F phenylalanine 3.4 12 1 G glycine 7.1 25 2 H histidine 1.1 4 1 I isoleucine 5.6 20 3 K lysine 4.2 15 2 L leucine 8.5 30 2 M methionine 2.0 7 2 N asparagine 5.4 19 1 P proline 5.9 21 3 Q glutamine 5.1 18 2 R arginine 3.4 12 1 S serine 8.5 30 2 T threonine 7.9 28 2 V valine 8.2 29 3 W tryptophan 2.0 7 1 Y tyrosine 3.4 12 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 neuronal growth regulator 1 LSAMP 0.482 limbic system-associated membrane protein NTM 0.422 neurotrimin isoform 1 NTM 0.420 neurotrimin isoform 2 OPCML 0.420 opioid binding protein/cell adhesion molecule-like is... NTM 0.417 neurotrimin isoform 4 NTM 0.417 neurotrimin isoform 3 OPCML 0.414 opioid binding protein/cell adhesion molecule-like i... IGLON5 0.333 IgLON family member 5 LOC100292387 0.114 PREDICTED: similar to hemicentin 2 HMCN2 0.114 PREDICTED: hemicentin 2 LOC100289200 0.114 PREDICTED: hypothetical protein XP_002342997 CNTN1 0.105 contactin 1 isoform 1 precursor CNTN1 0.105 contactin 1 isoform 2 precursor NCAM1 0.102 neural cell adhesion molecule 1 isoform 1 NCAM1 0.102 neural cell adhesion molecule 1 isoform 3 HMCN1 0.101 hemicentin 1 LRIG1 0.101 leucine-rich repeats and immunoglobulin-like domains... NCAM1 0.098 neural cell adhesion molecule 1 isoform 2 LRIG2 0.091 leucine-rich repeats and immunoglobulin-like domains ... CNTN5 0.091 contactin 5 isoform long CNTN5 0.091 contactin 5 isoform short PXDN 0.088 peroxidasin CADM3 0.088 cell adhesion molecule 3 isoform 2 HMCN2 0.087 PREDICTED: hemicentin 2 HMCN2 0.087 PREDICTED: hemicentin 2 CDON 0.087 surface glycoprotein, Ig superfamily member MXRA5 0.083 adlican LRIG3 0.081 leucine-rich repeats and immunoglobulin-like domains... LRIG3 0.081 leucine-rich repeats and immunoglobulin-like domain...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
