Guide to the Human Genome
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Name: PVRL2 Sequence: fasta or formatted (538aa) NCBI GI: 112789532
Description:

poliovirus receptor related 2 isoform delta precursor

Referenced in:

Additional Immunoglobulin-related Receptors

Other entries for this name:
alt prot [479aa] poliovirus receptor related 2 isoform alpha precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         48           3
 C cysteine            1.5          8           1
 D aspartate           4.3         23           2
 E glutamate           8.0         43           5
 F phenylalanine       2.8         15           1
 G glycine             7.8         42           2
 H histidine           1.7          9           1
 I isoleucine          3.5         19           2
 K lysine              3.2         17           1
 L leucine             9.3         50           7
 M methionine          1.5          8           1
 N asparagine          1.9         10           1
 P proline             9.5         51           2
 Q glutamine           4.3         23           2
 R arginine            4.1         22           1
 S serine              8.2         44           2
 T threonine           8.6         46           2
 V valine              7.2         39           1
 W tryptophan          1.3          7           1
 Y tyrosine            2.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poliovirus receptor related 2 isoform delta precurs... 
PVRL2                 0.653   poliovirus receptor related 2 isoform alpha precursor...
PVR                   0.293   poliovirus receptor isoform delta 
PVR                   0.293   poliovirus receptor isoform alpha 
PVR                   0.291   poliovirus receptor isoform beta 
PVR                   0.290   poliovirus receptor isoform gamma 
PVRL1                 0.172   poliovirus receptor-related 1 isoform 2 
PVRL1                 0.162   poliovirus receptor-related 1 isoform 1 
PVRL1                 0.148   poliovirus receptor-related 1 isoform 3 
PVRL3                 0.126   poliovirus receptor-related 3 
PVRL4                 0.093   poliovirus receptor-related 4 
CADM2                 0.060   immunoglobulin superfamily, member 4D 
CADM1                 0.060   immunoglobulin superfamily, member 4D isoform 2 [Ho...
CADM1                 0.058   immunoglobulin superfamily, member 4D isoform 1 [Ho...
CADM3                 0.055   cell adhesion molecule 3 isoform 2 
CADM3                 0.055   cell adhesion molecule 3 isoform 1 
CADM4                 0.043   cell adhesion molecule 4 
KIRREL2               0.038   kin of IRRE-like 2 isoform c 
KIRREL2               0.038   kin of IRRE-like 2 isoform a 
KIRREL2               0.033   kin of IRRE-like 2 isoform b 
CEACAM5               0.032   carcinoembryonic antigen-related cell adhesion molec...
CXADR                 0.028   coxsackie virus and adenovirus receptor precursor [Ho...
CD200                 0.028   CD200 antigen isoform b 
CD200                 0.028   CD200 antigen isoform a precursor 
HMCN1                 0.027   hemicentin 1 
TAPBPL                0.026   TAP binding protein-like 
HMCN2                 0.026   PREDICTED: hemicentin 2 
HMCN2                 0.026   PREDICTED: hemicentin 2 
HMCN2                 0.026   PREDICTED: hemicentin 2 
LSAMP                 0.025   limbic system-associated membrane protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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