NTM 36022

Name: NTM	Sequence: fasta or formatted (344aa)		NCBI GI: 7705413
Description: neurotrimin isoform 1		Referenced in: Neurons Additional Genes in Development
Other entries for this name: alt prot [344aa] neurotrimin isoform 2 alt prot [355aa] neurotrimin isoform 3 alt prot [316aa] neurotrimin isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 18 2 C cysteine 2.9 10 1 D aspartate 4.4 15 2 E glutamate 5.2 18 1 F phenylalanine 2.9 10 2 G glycine 7.0 24 1 H histidine 1.7 6 1 I isoleucine 5.2 18 1 K lysine 4.9 17 2 L leucine 8.7 30 3 M methionine 0.9 3 1 N asparagine 5.2 18 2 P proline 5.5 19 2 Q glutamine 3.2 11 1 R arginine 5.2 18 2 S serine 8.1 28 2 T threonine 6.7 23 1 V valine 11.6 40 3 W tryptophan 1.7 6 1 Y tyrosine 3.5 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neurotrimin isoform 1 NTM 0.987 neurotrimin isoform 3 NTM 0.917 neurotrimin isoform 2 NTM 0.905 neurotrimin isoform 4 OPCML 0.772 opioid binding protein/cell adhesion molecule-like is... OPCML 0.692 opioid binding protein/cell adhesion molecule-like i... LSAMP 0.516 limbic system-associated membrane protein NEGR1 0.439 neuronal growth regulator 1 IGLON5 0.399 IgLON family member 5 LOC100292387 0.118 PREDICTED: similar to hemicentin 2 HMCN2 0.118 PREDICTED: hemicentin 2 LOC100289200 0.118 PREDICTED: hypothetical protein XP_002342997 IGSF9B 0.115 immunoglobulin superfamily, member 9B HMCN1 0.115 hemicentin 1 NCAM1 0.114 neural cell adhesion molecule 1 isoform 1 NCAM1 0.114 neural cell adhesion molecule 1 isoform 3 NCAM1 0.109 neural cell adhesion molecule 1 isoform 2 TTN 0.107 titin isoform N2-A PXDN 0.107 peroxidasin MDGA1 0.098 MAM domain containing glycosylphosphatidylinositol a... CNTN2 0.096 contactin 2 precursor CADM2 0.095 immunoglobulin superfamily, member 4D CNTN1 0.095 contactin 1 isoform 1 precursor CNTN1 0.095 contactin 1 isoform 2 precursor LRIG2 0.092 leucine-rich repeats and immunoglobulin-like domains ... HMCN2 0.090 PREDICTED: hemicentin 2 HMCN2 0.090 PREDICTED: hemicentin 2 MDGA2 0.089 MAM domain containing 1 isoform 1 DSCAM 0.087 Down syndrome cell adhesion molecule isoform CHD2-42... CNTN6 0.087 contactin 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.