Guide to the Human Genome
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Name: TTN Sequence: fasta or formatted (33423aa) NCBI GI: 110349719
Description:

titin isoform N2-A

Referenced in:

Protein Composition and Structure
Domain Structure of Proteins
Fibronectin Family
Gene Structure
Muscle
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [27051aa] titin isoform novex-1
alt prot [26926aa] titin isoform N2-B
alt prot [27118aa] titin isoform novex-2
alt prot [5604aa] titin isoform novex-3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1       2027           3
 C cysteine            1.5        499           2
 D aspartate           5.0       1679           3
 E glutamate           9.2       3077           5
 F phenylalanine       2.6        883           3
 G glycine             6.1       2023           3
 H histidine           1.4        463           2
 I isoleucine          6.0       2002           3
 K lysine              8.6       2878           3
 L leucine             6.1       2029           3
 M methionine          1.1        384           2
 N asparagine          3.2       1079           2
 P proline             7.4       2463           6
 Q glutamine           2.7        893           2
 R arginine            4.9       1624           4
 S serine              7.1       2378           4
 T threonine           7.4       2483           5
 V valine              9.3       3119           3
 W tryptophan          1.4        462           2
 Y tyrosine            2.9        978           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   titin isoform N2-A 
TTN                   0.676   titin isoform novex-2 
TTN                   0.676   titin isoform novex-1 
TTN                   0.676   titin isoform N2-B 
TTN                   0.101   titin isoform novex-3 
HMCN1                 0.018   hemicentin 1 
HMCN2                 0.016   PREDICTED: hemicentin 2 
OBSCN                 0.013   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.013   obscurin, cytoskeletal calmodulin and titin-interac...
HMCN2                 0.012   PREDICTED: hemicentin 2 
HMCN2                 0.012   PREDICTED: hemicentin 2 
HSPG2                 0.007   heparan sulfate proteoglycan 2 
OBSL1                 0.006   obscurin-like 1 
IGSF22                0.006   immunoglobulin superfamily, member 22 
MYLK                  0.005   myosin light chain kinase isoform 1 
MYLK                  0.005   myosin light chain kinase isoform 2 
IGFN1                 0.005   immunoglobulin-like and fibronectin type III domain...
MYBPC1                0.004   myosin binding protein C, slow type isoform 4 
MYBPC1                0.004   myosin binding protein C, slow type isoform 2 
MYBPC1                0.004   myosin binding protein C, slow type isoform 1 
MYLK                  0.004   myosin light chain kinase isoform 3A 
MYLK                  0.004   myosin light chain kinase isoform 3B 
MYBPC1                0.004   myosin binding protein C, slow type isoform 3 
MYBPC3                0.004   myosin binding protein C, cardiac 
MYBPC2                0.004   myosin binding protein C, fast type 
MYOM3                 0.004   myomesin family, member 3 
PALLD                 0.004   palladin 
MYOM2                 0.004   myomesin 2 
MYOM1                 0.004   myomesin 1 isoform b 
MYOM1                 0.003   myomesin 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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