LOC100292387 22294

Name: LOC100292387	Sequence: fasta or formatted (1215aa)		NCBI GI: 239755187
Description: PREDICTED: similar to hemicentin 2		Referenced in: Additional Genes in Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 102 2 C cysteine 1.9 23 1 D aspartate 3.2 39 1 E glutamate 5.5 67 3 F phenylalanine 1.6 20 2 G glycine 9.0 109 2 H histidine 3.5 42 2 I isoleucine 3.2 39 2 K lysine 2.7 33 2 L leucine 10.0 121 2 M methionine 0.6 7 1 N asparagine 2.4 29 1 P proline 9.5 116 3 Q glutamine 4.5 55 2 R arginine 6.5 79 2 S serine 9.2 112 3 T threonine 6.0 73 2 V valine 8.8 107 2 W tryptophan 1.4 17 1 Y tyrosine 2.1 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hemicentin 2 HMCN2 0.794 PREDICTED: hemicentin 2 LOC100289200 0.535 PREDICTED: hypothetical protein XP_002342997 HMCN1 0.377 hemicentin 1 HMCN2 0.122 PREDICTED: hemicentin 2 HMCN2 0.122 PREDICTED: hemicentin 2 HSPG2 0.099 heparan sulfate proteoglycan 2 IGSF10 0.090 immunoglobulin superfamily, member 10 MXRA5 0.090 adlican TTN 0.083 titin isoform N2-A DSCAML1 0.078 Down syndrome cell adhesion molecule like 1 DSCAM 0.076 Down syndrome cell adhesion molecule isoform CHD2-42... PXDN 0.070 peroxidasin ROBO1 0.067 roundabout 1 isoform a ROBO1 0.066 roundabout 1 isoform b ROBO3 0.066 roundabout, axon guidance receptor, homolog 3 ROBO1 0.064 roundabout 1 isoform d ROBO1 0.064 roundabout 1 isoform c LOC642132 0.064 PREDICTED: similar to roundabout 1 isoform 1 LOC642132 0.064 PREDICTED: similar to roundabout 1 isoform 2 ROBO2 0.064 roundabout, axon guidance receptor, homolog 2 isofo... ROBO2 0.064 roundabout, axon guidance receptor, homolog 2 isofor... SDK2 0.063 sidekick 2 PTK7 0.061 PTK7 protein tyrosine kinase 7 isoform a precursor [... PXDNL 0.061 peroxidasin homolog-like SDK1 0.058 sidekick 1 CNTN4 0.057 contactin 4 isoform a precursor NFASC 0.055 neurofascin isoform 3 precursor NFASC 0.055 neurofascin isoform 4 precursor OBSCN 0.053 obscurin, cytoskeletal calmodulin and titin-interact... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.