NTM 14232

Name: NTM	Sequence: fasta or formatted (355aa)		NCBI GI: 221316757
Description: neurotrimin isoform 3		Referenced in: Neurons Additional Genes in Development
Other entries for this name: alt prot [344aa] neurotrimin isoform 2 alt prot [316aa] neurotrimin isoform 4 alt prot [344aa] neurotrimin isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 19 2 C cysteine 2.8 10 1 D aspartate 4.2 15 2 E glutamate 5.4 19 1 F phenylalanine 2.8 10 2 G glycine 6.8 24 1 H histidine 1.7 6 1 I isoleucine 5.1 18 1 K lysine 5.4 19 2 L leucine 8.7 31 3 M methionine 0.8 3 1 N asparagine 5.1 18 2 P proline 5.6 20 2 Q glutamine 3.1 11 1 R arginine 5.1 18 2 S serine 7.9 28 2 T threonine 7.3 26 2 V valine 11.5 41 3 W tryptophan 2.0 7 1 Y tyrosine 3.4 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neurotrimin isoform 3 NTM 0.954 neurotrimin isoform 1 NTM 0.874 neurotrimin isoform 2 NTM 0.873 neurotrimin isoform 4 OPCML 0.735 opioid binding protein/cell adhesion molecule-like is... OPCML 0.658 opioid binding protein/cell adhesion molecule-like i... LSAMP 0.488 limbic system-associated membrane protein NEGR1 0.419 neuronal growth regulator 1 IGLON5 0.378 IgLON family member 5 LOC100292387 0.114 PREDICTED: similar to hemicentin 2 HMCN2 0.114 PREDICTED: hemicentin 2 LOC100289200 0.114 PREDICTED: hypothetical protein XP_002342997 NCAM1 0.113 neural cell adhesion molecule 1 isoform 1 NCAM1 0.113 neural cell adhesion molecule 1 isoform 3 IGSF9B 0.113 immunoglobulin superfamily, member 9B HMCN1 0.112 hemicentin 1 NCAM1 0.107 neural cell adhesion molecule 1 isoform 2 TTN 0.103 titin isoform N2-A PXDN 0.103 peroxidasin CNTN2 0.094 contactin 2 precursor MDGA1 0.094 MAM domain containing glycosylphosphatidylinositol a... CADM2 0.092 immunoglobulin superfamily, member 4D CNTN1 0.092 contactin 1 isoform 1 precursor CNTN1 0.092 contactin 1 isoform 2 precursor LRIG2 0.089 leucine-rich repeats and immunoglobulin-like domains ... HMCN2 0.087 PREDICTED: hemicentin 2 HMCN2 0.087 PREDICTED: hemicentin 2 MDGA2 0.086 MAM domain containing 1 isoform 1 DSCAM 0.084 Down syndrome cell adhesion molecule isoform CHD2-42... CNTN6 0.084 contactin 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.