Guide to the Human Genome
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Name: CD200R1 Sequence: fasta or formatted (165aa) NCBI GI: 25777657
Description:

CD200 receptor 1 isoform c

Referenced in:

Macrophages and Monocytes

Other entries for this name:
alt prot [348aa] CD200 receptor 1 isoform a
alt prot [188aa] CD200 receptor 1 isoform b
alt prot [325aa] CD200 receptor 1 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5          9           2
 C cysteine            4.2          7           2
 D aspartate           4.2          7           1
 E glutamate           4.8          8           1
 F phenylalanine       1.8          3           1
 G glycine             3.6          6           1
 H histidine           3.0          5           2
 I isoleucine          8.5         14           3
 K lysine              4.8          8           2
 L leucine            10.9         18           3
 M methionine          2.4          4           1
 N asparagine          5.5          9           1
 P proline             4.8          8           2
 Q glutamine           3.6          6           1
 R arginine            5.5          9           1
 S serine              5.5          9           3
 T threonine           9.7         16           1
 V valine              5.5          9           1
 W tryptophan          2.4          4           1
 Y tyrosine            3.6          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD200 receptor 1 isoform c 
CD200R1               0.959   CD200 receptor 1 isoform b 
CD200R1               0.900   CD200 receptor 1 isoform d 
CD200R1               0.859   CD200 receptor 1 isoform a 
CD200R1L              0.644   CD200 cell surface glycoprotein receptor 2 
CNTN6                 0.025   contactin 6 
FGFR2                 0.022   fibroblast growth factor receptor 2 isoform 9 precu...
FGFR2                 0.022   fibroblast growth factor receptor 2 isoform 3 precu...
FGFR2                 0.022   fibroblast growth factor receptor 2 isoform 8 precu...
FGFR2                 0.022   fibroblast growth factor receptor 2 isoform 7 precu...
FGFR2                 0.022   fibroblast growth factor receptor 2 isoform 6 precu...
FGFR2                 0.022   fibroblast growth factor receptor 2 isoform 5 precu...
FGFR2                 0.022   fibroblast growth factor receptor 2 isoform 1 precu...
FGFR2                 0.022   fibroblast growth factor receptor 2 isoform 2 precu...
FGFR2                 0.022   fibroblast growth factor receptor 2 isoform 4 precu...
ALDH3B2               0.022   aldehyde dehydrogenase 3B2 
ALDH3B2               0.022   aldehyde dehydrogenase 3B2 
HMCN1                 0.016   hemicentin 1 
PTK7                  0.016   PTK7 protein tyrosine kinase 7 isoform a precursor [...
PTK7                  0.016   PTK7 protein tyrosine kinase 7 isoform d precursor [...
MXRA5                 0.013   adlican 
HMCN2                 0.013   PREDICTED: hemicentin 2 
HMCN2                 0.013   PREDICTED: hemicentin 2 
HMCN2                 0.013   PREDICTED: hemicentin 2 
DSCAM                 0.013   Down syndrome cell adhesion molecule isoform CHD2-42...
PTK7                  0.013   PTK7 protein tyrosine kinase 7 isoform b precursor [...
IGSF10                0.013   immunoglobulin superfamily, member 10 
ALDH3B1               0.009   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B1               0.009   aldehyde dehydrogenase 3B1 isoform b 
ALDH3B1               0.009   aldehyde dehydrogenase 3B1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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