SLIT1 10227

Name: SLIT1	Sequence: fasta or formatted (1534aa)		NCBI GI: 188528675
Description: slit homolog 1		Referenced in: Neurons
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 98 3 C cysteine 6.9 106 2 D aspartate 4.8 73 2 E glutamate 5.2 80 2 F phenylalanine 3.3 50 1 G glycine 8.3 128 2 H histidine 2.4 37 1 I isoleucine 4.0 62 1 K lysine 3.7 57 2 L leucine 11.4 175 4 M methionine 1.3 20 1 N asparagine 6.5 99 4 P proline 5.9 91 2 Q glutamine 5.5 85 1 R arginine 5.1 79 2 S serine 6.6 102 2 T threonine 5.3 81 2 V valine 4.2 64 2 W tryptophan 1.0 15 1 Y tyrosine 2.1 32 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 slit homolog 1 SLIT2 0.672 slit homolog 2 SLIT3 0.599 slit homolog 3 NOTCH1 0.063 notch1 preproprotein DLL1 0.063 delta-like 1 NOTCH2 0.059 notch 2 preproprotein NOTCH3 0.058 Notch homolog 3 JAG2 0.058 jagged 2 isoform a precursor SVEP1 0.058 polydom JAG2 0.056 jagged 2 isoform b precursor NOTCH4 0.056 notch4 preproprotein CRB1 0.055 crumbs homolog 1 precursor JAG1 0.055 jagged 1 precursor DNER 0.050 delta-notch-like EGF repeat-containing transmembran... DLL4 0.050 delta-like 4 protein precursor LRRC15 0.048 leucine rich repeat containing 15 isoform a LRRC15 0.048 leucine rich repeat containing 15 isoform b CRB2 0.046 crumbs homolog 2 LRIG1 0.046 leucine-rich repeats and immunoglobulin-like domains... EYS 0.045 eyes shut homolog isoform 1 SNED1 0.045 6720455I24Rik homolog DLL3 0.042 delta-like 3 protein isoform 1 precursor DLL3 0.042 delta-like 3 protein isoform 2 precursor CPN2 0.041 carboxypeptidase N, polypeptide 2, 83kD LINGO3 0.041 leucine rich repeat and Ig domain containing 3 [Hom... FAT4 0.040 FAT tumor suppressor homolog 4 SLITRK6 0.039 slit and trk like 6 DLK2 0.038 EGF-like-domain, multiple 9 DLK2 0.038 EGF-like-domain, multiple 9 FAT1 0.038 FAT tumor suppressor 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.