Guide to the Human Genome
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Name: FBN2 Sequence: fasta or formatted (2912aa) NCBI GI: 66346695
Description:

fibrillin 2 precursor

Referenced in:

Extracellular Matrix

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         99           2
 C cysteine           12.5        363           3
 D aspartate           5.8        170           2
 E glutamate           6.5        190           2
 F phenylalanine       3.3         97           2
 G glycine            11.5        336           2
 H histidine           1.5         45           2
 I isoleucine          4.9        142           2
 K lysine              3.3         95           3
 L leucine             5.0        145           3
 M methionine          2.0         59           3
 N asparagine          7.0        203           2
 P proline             6.0        175           4
 Q glutamine           3.7        108           2
 R arginine            4.4        128           4
 S serine              6.2        180           4
 T threonine           5.6        164           3
 V valine              3.8        112           2
 W tryptophan          0.5         15           1
 Y tyrosine            3.0         86           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibrillin 2 precursor 
FBN1                  0.703   fibrillin 1 precursor 
FBN3                  0.683   fibrillin 3 precursor 
LTBP4                 0.077   latent transforming growth factor beta binding prot...
LTBP4                 0.077   latent transforming growth factor beta binding prot...
LTBP4                 0.077   latent transforming growth factor beta binding prot...
LTBP2                 0.072   latent transforming growth factor beta binding protei...
NOTCH2                0.072   notch 2 preproprotein 
NOTCH1                0.069   notch1 preproprotein 
LTBP1                 0.069   latent transforming growth factor beta binding prote...
LTBP1                 0.069   latent transforming growth factor beta binding prote...
NOTCH3                0.067   Notch homolog 3 
LTBP3                 0.064   latent transforming growth factor beta binding prote...
LTBP3                 0.063   latent transforming growth factor beta binding prot...
NOTCH4                0.045   notch4 preproprotein 
MEGF6                 0.043   EGF-like-domain, multiple 3 
FBLN2                 0.039   fibulin 2 isoform a precursor 
MATN2                 0.039   matrilin 2 isoform b precursor 
MATN2                 0.039   matrilin 2 isoform a precursor 
FBLN2                 0.037   fibulin 2 isoform b precursor 
SCUBE1                0.035   signal peptide, CUB domain, EGF-like 1 
EYS                   0.034   eyes shut homolog isoform 1 
JAG2                  0.033   jagged 2 isoform a precursor 
FBLN1                 0.032   fibulin 1 isoform C precursor 
FBLN1                 0.032   fibulin 1 isoform D 
JAG2                  0.032   jagged 2 isoform b precursor 
HMCN1                 0.032   hemicentin 1 
FBLN1                 0.032   fibulin 1 isoform B precursor 
FBLN1                 0.032   fibulin 1 isoform A precursor 
SCUBE2                0.031   CEGP1 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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