Guide to the Human Genome
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Name: FAM98B Sequence: fasta or formatted (433aa) NCBI GI: 109452587
Description:

family with sequence similarity 98, member B isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {330aa} family with sequence similarity 98, member B isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         18           2
 C cysteine            1.6          7           1
 D aspartate           4.8         21           2
 E glutamate           6.7         29           2
 F phenylalanine       1.6          7           1
 G glycine            21.9         95          15
 H histidine           0.9          4           1
 I isoleucine          4.2         18           2
 K lysine              6.7         29           3
 L leucine             9.0         39           3
 M methionine          2.5         11           1
 N asparagine          2.3         10           1
 P proline             4.8         21           4
 Q glutamine           4.4         19           1
 R arginine            6.5         28           3
 S serine              6.5         28           2
 T threonine           3.7         16           2
 V valine              3.0         13           1
 W tryptophan          1.6          7           1
 Y tyrosine            3.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 98, member B isofor... 
FAM98B                0.645   family with sequence similarity 98, member B isofor...
FAM98A                0.481   hypothetical protein LOC25940 
FAM98C                0.189   hypothetical protein LOC147965 
KRT9                  0.106   keratin 9 
HNRNPA3               0.105   heterogeneous nuclear ribonucleoprotein A3 
TAF15                 0.104   TBP-associated factor 15 isoform 2 
TAF15                 0.104   TBP-associated factor 15 isoform 1 
KRT10                 0.096   keratin 10 
LOR                   0.094   loricrin 
KRT3                  0.094   keratin 3 
KRT1                  0.094   keratin 1 
HNRNPA1               0.091   heterogeneous nuclear ribonucleoprotein A1 isoform b...
HNRNPA2B1             0.086   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.086   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
HNRNPA0               0.084   heterogeneous nuclear ribonucleoprotein A0 
FBL                   0.079   fibrillarin 
KRT2                  0.079   keratin 2 
FUS                   0.076   fusion (involved in t(12;16) in malignant liposarcoma...
PPP1R10               0.070   protein phosphatase 1, regulatory subunit 10 
DHX9                  0.070   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
KRT76                 0.068   keratin 76 
HNRNPA1               0.065   heterogeneous nuclear ribonucleoprotein A1 isoform a ...
ARID1B                0.065   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.065   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.065   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
IRS4                  0.064   insulin receptor substrate 4 
GAR1                  0.064   nucleolar protein family A, member 1 
GAR1                  0.064   nucleolar protein family A, member 1 
MBD2                  0.057   methyl-CpG binding domain protein 2 testis-specific i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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