Guide to the Human Genome
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Name: KRT3 Sequence: fasta or formatted (628aa) NCBI GI: 109148552
Description:

keratin 3

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         49           2
 C cysteine            0.5          3           1
 D aspartate           4.0         25           2
 E glutamate           6.1         38           2
 F phenylalanine       4.8         30           1
 G glycine            20.9        131           5
 H histidine           0.8          5           1
 I isoleucine          4.5         28           2
 K lysine              4.5         28           3
 L leucine             7.6         48           2
 M methionine          1.9         12           1
 N asparagine          4.1         26           2
 P proline             1.4          9           1
 Q glutamine           5.3         33           3
 R arginine            5.1         32           1
 S serine             11.1         70           3
 T threonine           2.9         18           2
 V valine              3.8         24           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.9         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 3 
KRT76                 0.724   keratin 76 
KRT5                  0.565   keratin 5 
KRT2                  0.557   keratin 2 
KRT1                  0.551   keratin 1 
KRT6A                 0.537   keratin 6A 
KRT6B                 0.536   keratin 6B 
KRT6C                 0.533   keratin 6C 
KRT4                  0.505   keratin 4 
KRT75                 0.482   keratin 75 
KRT77                 0.479   keratin 77 
KRT79                 0.455   keratin 6L 
KRT73                 0.437   keratin 73 
KRT71                 0.432   keratin 71 
KRT74                 0.431   keratin 6 irs4 
KRT72                 0.413   keratin 72 isoform 1 
KRT72                 0.413   keratin 72 isoform 1 
KRT8                  0.392   keratin 8 
KRT7                  0.380   keratin 7 
KRT84                 0.363   keratin, hair, basic, 4 
KRT78                 0.357   keratin 5b 
KRT85                 0.322   keratin 85 
KRT72                 0.320   keratin 72 isoform 2 
KRT82                 0.316   keratin 82 
KRT81                 0.316   keratin, hair, basic, 1 
LOC100293351          0.314   PREDICTED: hypothetical protein isoform 2 
LOC100293351          0.314   PREDICTED: hypothetical protein isoform 1 
LOC100293351          0.314   PREDICTED: hypothetical protein isoform 3 
KRT86                 0.314   keratin 86 
KRT83                 0.312   keratin 83 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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