Guide to the Human Genome
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Name: HNRNPA2B1 Sequence: fasta or formatted (353aa) NCBI GI: 14043072
Description:

heterogeneous nuclear ribonucleoprotein A2/B1 isoform B1

Referenced in:

hnRNP

Other entries for this name:
alt prot [341aa] heterogeneous nuclear ribonucleoprotein A2/B1 isoform A2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         11           2
 C cysteine            0.3          1           1
 D aspartate           4.8         17           2
 E glutamate           6.2         22           2
 F phenylalanine       5.4         19           1
 G glycine            24.4         86           4
 H histidine           2.0          7           2
 I isoleucine          2.5          9           2
 K lysine              5.4         19           2
 L leucine             2.8         10           1
 M methionine          2.0          7           1
 N asparagine          5.4         19           1
 P proline             4.2         15           1
 Q glutamine           2.8         10           2
 R arginine            7.1         25           1
 S serine              7.1         25           2
 T threonine           3.4         12           2
 V valine              4.5         16           2
 W tryptophan          0.3          1           1
 Y tyrosine            6.2         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heterogeneous nuclear ribonucleoprotein A2/B1 isofor... 
HNRNPA2B1             0.964   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
HNRNPA3               0.635   heterogeneous nuclear ribonucleoprotein A3 
HNRNPA1               0.614   heterogeneous nuclear ribonucleoprotein A1 isoform b...
HNRNPA1               0.543   heterogeneous nuclear ribonucleoprotein A1 isoform a ...
HNRNPA1L2             0.533   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1L2             0.533   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
LOC120364             0.467   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.467   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.466   PREDICTED: similar to heterogeneous nuclear ribonuc...
HNRNPA0               0.387   heterogeneous nuclear ribonucleoprotein A0 
HNRNPAB               0.245   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPD                0.237   heterogeneous nuclear ribonucleoprotein D isoform b ...
HNRPDL                0.237   heterogeneous nuclear ribonucleoprotein D-like [Homo...
HNRNPD                0.236   heterogeneous nuclear ribonucleoprotein D isoform a ...
HNRNPAB               0.212   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPD                0.204   heterogeneous nuclear ribonucleoprotein D isoform d ...
HNRNPD                0.201   heterogeneous nuclear ribonucleoprotein D isoform c ...
MSI2                  0.193   musashi 2 isoform a 
MSI1                  0.189   musashi 1 
MSI2                  0.183   musashi 2 isoform b 
DAZAP1                0.178   DAZ associated protein 1 isoform a 
DAZAP1                0.178   DAZ associated protein 1 isoform b 
LOC100294395          0.139   PREDICTED: similar to serum response factor-related...
TAF15                 0.123   TBP-associated factor 15 isoform 2 
TAF15                 0.123   TBP-associated factor 15 isoform 1 
TARDBP                0.117   TAR DNA binding protein 
KRT9                  0.113   keratin 9 
NCL                   0.105   nucleolin 
FAM98B                0.103   family with sequence similarity 98, member B isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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