Guide to the Human Genome
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Name: FAM98B Sequence: fasta or formatted (330aa) NCBI GI: 109452589
Description:

family with sequence similarity 98, member B isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {433aa} family with sequence similarity 98, member B isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         18           2
 C cysteine            2.1          7           1
 D aspartate           5.5         18           2
 E glutamate           8.2         27           2
 F phenylalanine       3.0         10           1
 G glycine             4.8         16           2
 H histidine           1.2          4           1
 I isoleucine          5.8         19           2
 K lysine              8.5         28           3
 L leucine            12.7         42           3
 M methionine          3.6         12           1
 N asparagine          3.0         10           1
 P proline             3.6         12           1
 Q glutamine           5.2         17           1
 R arginine            4.2         14           3
 S serine             10.0         33           2
 T threonine           5.2         17           2
 V valine              4.5         15           1
 W tryptophan          0.9          3           1
 Y tyrosine            2.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 98, member B isofor... 
FAM98B                0.907   family with sequence similarity 98, member B isofor...
FAM98A                0.446   hypothetical protein LOC25940 
FAM98C                0.189   hypothetical protein LOC147965 
FILIP1                0.024   filamin A interacting protein 1 
ANGPT2                0.021   angiopoietin 2 isoform b precursor 
ANGPT2                0.021   angiopoietin 2 isoform a precursor 
ANGPT2                0.019   angiopoietin 2 isoform c precursor 
AKAP9                 0.016   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.016   A-kinase anchor protein 9 isoform 3 
SYNE1                 0.016   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.016   spectrin repeat containing, nuclear envelope 1 isof...
GTF3C1                0.016   general transcription factor IIIC, polypeptide 1, a...
MYH11                 0.014   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.014   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.014   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.014   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
KIAA0100              0.013   hypothetical protein LOC9703 
EEA1                  0.013   early endosome antigen 1, 162kD 
OFD1                  0.011   oral-facial-digital syndrome 1 
TPR                   0.011   nuclear pore complex-associated protein TPR 
TSGA10                0.011   testis specific, 10 
TSGA10                0.011   testis specific, 10 
SDCCAG3               0.011   serologically defined colon cancer antigen 3 isoform...
SDCCAG3               0.011   serologically defined colon cancer antigen 3 isoform...
SDCCAG3               0.011   serologically defined colon cancer antigen 3 isoform...
RANBP17               0.011   RAN binding protein 17 
HMMR                  0.010   hyaluronan-mediated motility receptor isoform d [Ho...
HMMR                  0.010   hyaluronan-mediated motility receptor isoform a [Ho...
HMMR                  0.010   hyaluronan-mediated motility receptor isoform c [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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