TAF15 12846

Name: TAF15	Sequence: fasta or formatted (592aa)		NCBI GI: 21327701
Description: TBP-associated factor 15 isoform 1		Referenced in: Nuclear Receptors RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [589aa] TBP-associated factor 15 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 1.5 9 2 C cysteine 0.7 4 1 D aspartate 9.3 55 2 E glutamate 2.5 15 1 F phenylalanine 2.2 13 2 G glycine 29.6 175 3 H histidine 1.2 7 2 I isoleucine 1.4 8 2 K lysine 2.7 16 2 L leucine 0.3 2 1 M methionine 1.2 7 1 N asparagine 4.4 26 2 P proline 3.0 18 2 Q glutamine 7.1 42 3 R arginine 9.5 56 2 S serine 10.5 62 2 T threonine 2.4 14 2 V valine 1.2 7 1 W tryptophan 0.3 2 1 Y tyrosine 9.1 54 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TBP-associated factor 15 isoform 1 TAF15 0.991 TBP-associated factor 15 isoform 2 FUS 0.302 fusion (involved in t(12;16) in malignant liposarcoma... EWSR1 0.261 Ewing sarcoma breakpoint region 1 isoform 4 EWSR1 0.245 Ewing sarcoma breakpoint region 1 isoform 3 EWSR1 0.245 Ewing sarcoma breakpoint region 1 isoform 1 EWSR1 0.245 Ewing sarcoma breakpoint region 1 isoform 2 KRT9 0.105 keratin 9 HNRNPA1 0.097 heterogeneous nuclear ribonucleoprotein A1 isoform b... HNRNPA3 0.094 heterogeneous nuclear ribonucleoprotein A3 HRNR 0.086 hornerin FLG2 0.085 filaggrin family member 2 KRT10 0.077 keratin 10 LOR 0.075 loricrin FAM98B 0.072 family with sequence similarity 98, member B isofor... HNRNPA2B1 0.070 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... HNRNPA2B1 0.070 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... FAM98A 0.069 hypothetical protein LOC25940 KRT3 0.065 keratin 3 HNRNPA0 0.061 heterogeneous nuclear ribonucleoprotein A0 HNRNPA1 0.059 heterogeneous nuclear ribonucleoprotein A1 isoform a ... ILF3 0.059 interleukin enhancer binding factor 3 isoform d [Ho... ILF3 0.059 interleukin enhancer binding factor 3 isoform a [Hom... RBMXL1 0.059 RNA binding motif protein, X-linked-like 1 RBMXL1 0.059 RNA binding motif protein, X-linked-like 1 RBMX 0.058 RNA binding motif protein, X-linked KRT1 0.057 keratin 1 PPP1R10 0.056 protein phosphatase 1, regulatory subunit 10 KRT2 0.056 keratin 2 HNRNPA1L2 0.055 heterogeneous nuclear ribonucleoprotein A1-like [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.