GAR1 4989

Name: GAR1	Sequence: fasta or formatted (217aa)		NCBI GI: 15011916
Description: nucleolar protein family A, member 1		Referenced in: Protein Composition and Structure Nucleus and Nucleolus
Other entries for this name: alt mRNA [217aa] nucleolar protein family A, member 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 0.9 2 1 C cysteine 1.4 3 1 D aspartate 3.2 7 2 E glutamate 4.1 9 1 F phenylalanine 8.3 18 1 G glycine 33.6 73 9 H histidine 1.4 3 1 I isoleucine 1.8 4 1 K lysine 5.5 12 2 L leucine 5.1 11 2 M methionine 0.9 2 1 N asparagine 4.1 9 1 P proline 5.5 12 2 Q glutamine 2.8 6 1 R arginine 11.5 25 1 S serine 3.2 7 2 T threonine 0.9 2 2 V valine 3.2 7 2 W tryptophan 0.0 0 0 Y tyrosine 2.3 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleolar protein family A, member 1 GAR1 1.000 nucleolar protein family A, member 1 FUS 0.138 fusion (involved in t(12;16) in malignant liposarcoma... FAM98B 0.125 family with sequence similarity 98, member B isofor... FBL 0.103 fibrillarin EWSR1 0.100 Ewing sarcoma breakpoint region 1 isoform 4 EWSR1 0.100 Ewing sarcoma breakpoint region 1 isoform 2 NCL 0.098 nucleolin EWSR1 0.096 Ewing sarcoma breakpoint region 1 isoform 3 EWSR1 0.096 Ewing sarcoma breakpoint region 1 isoform 1 KRT1 0.087 keratin 1 HNRNPA3 0.080 heterogeneous nuclear ribonucleoprotein A3 TAF15 0.078 TBP-associated factor 15 isoform 2 TAF15 0.078 TBP-associated factor 15 isoform 1 KRT10 0.078 keratin 10 KRT2 0.078 keratin 2 DHX9 0.076 DEAH (Asp-Glu-Ala-His) box polypeptide 9 KRT9 0.076 keratin 9 KRT13 0.071 keratin 13 isoform b KRT13 0.071 keratin 13 isoform a HNRNPA0 0.071 heterogeneous nuclear ribonucleoprotein A0 HNRNPUL1 0.071 heterogeneous nuclear ribonucleoprotein U-like 1 iso... HNRNPUL1 0.071 heterogeneous nuclear ribonucleoprotein U-like 1 iso... FAM98A 0.071 hypothetical protein LOC25940 POU4F1 0.071 POU domain, class 4, transcription factor 1 ARID1B 0.071 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.071 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.071 AT rich interactive domain 1B (SWI1-like) isoform 3 ... LOC100292082 0.071 PREDICTED: hypothetical protein XP_002345881 KRT3 0.071 keratin 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.