Guide to the Human Genome
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Name: HNRNPA2B1 Sequence: fasta or formatted (341aa) NCBI GI: 4504447
Description:

heterogeneous nuclear ribonucleoprotein A2/B1 isoform A2

Referenced in:

hnRNP

Other entries for this name:
alt prot [353aa] heterogeneous nuclear ribonucleoprotein A2/B1 isoform B1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         11           2
 C cysteine            0.3          1           1
 D aspartate           5.0         17           2
 E glutamate           5.9         20           2
 F phenylalanine       5.6         19           1
 G glycine            25.2         86           4
 H histidine           2.1          7           2
 I isoleucine          2.6          9           2
 K lysine              4.7         16           2
 L leucine             2.3          8           1
 M methionine          2.1          7           1
 N asparagine          5.6         19           1
 P proline             4.1         14           1
 Q glutamine           2.9         10           2
 R arginine            7.0         24           1
 S serine              7.3         25           2
 T threonine           2.9         10           2
 V valine              4.4         15           2
 W tryptophan          0.3          1           1
 Y tyrosine            6.5         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heterogeneous nuclear ribonucleoprotein A2/B1 isoform... 
HNRNPA2B1             0.994   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA3               0.655   heterogeneous nuclear ribonucleoprotein A3 
HNRNPA1               0.634   heterogeneous nuclear ribonucleoprotein A1 isoform b...
HNRNPA1               0.560   heterogeneous nuclear ribonucleoprotein A1 isoform a ...
HNRNPA1L2             0.550   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1L2             0.550   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
LOC120364             0.482   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.482   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.480   PREDICTED: similar to heterogeneous nuclear ribonuc...
HNRNPA0               0.399   heterogeneous nuclear ribonucleoprotein A0 
HNRNPAB               0.253   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRPDL                0.243   heterogeneous nuclear ribonucleoprotein D-like [Homo...
HNRNPD                0.243   heterogeneous nuclear ribonucleoprotein D isoform b ...
HNRNPD                0.241   heterogeneous nuclear ribonucleoprotein D isoform a ...
HNRNPAB               0.219   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPD                0.209   heterogeneous nuclear ribonucleoprotein D isoform d ...
HNRNPD                0.207   heterogeneous nuclear ribonucleoprotein D isoform c ...
MSI2                  0.199   musashi 2 isoform a 
MSI1                  0.195   musashi 1 
MSI2                  0.189   musashi 2 isoform b 
DAZAP1                0.183   DAZ associated protein 1 isoform a 
DAZAP1                0.183   DAZ associated protein 1 isoform b 
LOC100294395          0.143   PREDICTED: similar to serum response factor-related...
TAF15                 0.126   TBP-associated factor 15 isoform 2 
TAF15                 0.126   TBP-associated factor 15 isoform 1 
TARDBP                0.119   TAR DNA binding protein 
KRT9                  0.116   keratin 9 
NCL                   0.108   nucleolin 
FAM98B                0.107   family with sequence similarity 98, member B isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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