MBD2 36240

Name: MBD2	Sequence: fasta or formatted (302aa)		NCBI GI: 7710145
Description: methyl-CpG binding domain protein 2 testis-specific isoform		Referenced in: DNA Methylation DNases, Recombination, and DNA Repair Histones, Related Proteins, and Modifying Enzymes Small RNAs in RNA Processing Testes and Sperm
Other entries for this name: alt prot [411aa] methyl-CpG binding domain protein 2 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 20 2 C cysteine 3.6 11 2 D aspartate 2.3 7 1 E glutamate 4.0 12 2 F phenylalanine 2.0 6 1 G glycine 20.2 61 4 H histidine 2.0 6 1 I isoleucine 1.0 3 1 K lysine 5.0 15 2 L leucine 7.9 24 2 M methionine 1.3 4 2 N asparagine 2.6 8 1 P proline 8.9 27 2 Q glutamine 3.6 11 1 R arginine 11.9 36 2 S serine 8.9 27 2 T threonine 1.7 5 1 V valine 2.6 8 1 W tryptophan 1.7 5 1 Y tyrosine 2.0 6 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 methyl-CpG binding domain protein 2 testis-specific i... MBD2 0.756 methyl-CpG binding domain protein 2 isoform 1 MBD3 0.172 methyl-CpG binding domain protein 3 MBD1 0.098 methyl-CpG binding domain protein 1 isoform 2 MBD1 0.098 methyl-CpG binding domain protein 1 isoform 4 MBD1 0.098 methyl-CpG binding domain protein 1 isoform PCM1 [Ho... MBD1 0.098 methyl-CpG binding domain protein 1 isoform 1 MBD1 0.098 methyl-CpG binding domain protein 1 isoform 3 [Homo... FAM98B 0.080 family with sequence similarity 98, member B isofor... MECP2 0.077 methyl CpG binding protein 2 isoform 2 MECP2 0.077 methyl CpG binding protein 2 isoform 1 KRT9 0.071 keratin 9 KRT2 0.068 keratin 2 KRT10 0.066 keratin 10 LOR 0.066 loricrin KRT1 0.066 keratin 1 IRS4 0.066 insulin receptor substrate 4 KRT3 0.064 keratin 3 FBL 0.059 fibrillarin C1orf77 0.059 small protein rich in arginine and glycine TAF15 0.053 TBP-associated factor 15 isoform 2 TAF15 0.053 TBP-associated factor 15 isoform 1 PPP1R10 0.051 protein phosphatase 1, regulatory subunit 10 HNRNPA2B1 0.051 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... HNRNPA2B1 0.051 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... KRT76 0.051 keratin 76 FUS 0.051 fusion (involved in t(12;16) in malignant liposarcoma... LRCH2 0.048 leucine-rich repeats and calponin homology (CH) dom... HNRNPA3 0.048 heterogeneous nuclear ribonucleoprotein A3 FAM98A 0.047 hypothetical protein LOC25940 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.