GOPC 37848

Name: GOPC	Sequence: fasta or formatted (462aa)		NCBI GI: 9966877
Description: golgi associated PDZ and coiled-coil motif containing isoform a		Referenced in: Coiled-Coil Proteins PDZ Domain ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [454aa] golgi associated PDZ and coiled-coil motif containing isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 38 3 C cysteine 1.5 7 1 D aspartate 6.7 31 2 E glutamate 9.5 44 2 F phenylalanine 1.3 6 1 G glycine 9.5 44 3 H histidine 4.3 20 1 I isoleucine 4.1 19 1 K lysine 8.0 37 2 L leucine 11.5 53 3 M methionine 1.3 6 1 N asparagine 2.4 11 1 P proline 3.7 17 2 Q glutamine 5.4 25 2 R arginine 4.3 20 2 S serine 5.8 27 2 T threonine 3.5 16 1 V valine 6.5 30 2 W tryptophan 0.4 2 1 Y tyrosine 1.9 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 golgi associated PDZ and coiled-coil motif containing... GOPC 0.974 golgi associated PDZ and coiled-coil motif containin... SNTB2 0.067 basic beta 2 syntrophin SNTB1 0.065 basic beta 1 syntrophin SNTA1 0.059 acidic alpha 1 syntrophin SNTG2 0.056 syntrophin, gamma 2 LIN7C 0.055 lin-7 homolog C LIN7A 0.055 lin-7 homolog A LIN7B 0.055 lin-7 homolog B SNTG1 0.050 syntrophin, gamma 1 DFNB31 0.044 CASK-interacting protein CIP98 isoform 1 INADL 0.042 InaD-like PTPN13 0.039 protein tyrosine phosphatase, non-receptor type 13 i... DLG3 0.038 synapse-associated protein 102 isoform a MPP7 0.038 palmitoylated membrane protein 7 DLG3 0.038 synapse-associated protein 102 isoform b GRIP1 0.036 glutamate receptor interacting protein 1 USH1C 0.034 harmonin isoform b3 USH1C 0.034 harmonin isoform a DLG2 0.033 chapsyn-110 isoform 3 DLG2 0.033 chapsyn-110 isoform 1 DLG2 0.033 chapsyn-110 isoform 2 SCRIB 0.033 scribble isoform b SCRIB 0.033 scribble isoform a DLG4 0.033 post-synaptic density protein 95 isoform 1 DLG4 0.033 post-synaptic density protein 95 isoform 2 GRIP2 0.033 glutamate receptor interacting protein 2 PDZD2 0.033 PDZ domain containing 2 MAGI1 0.033 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.033 membrane associated guanylate kinase, WW and PDZ dom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.