LIN7C 36973

Name: LIN7C	Sequence: fasta or formatted (197aa)		NCBI GI: 8922944
Description: lin-7 homolog C		Referenced in: PDZ Domain
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 18 2 C cysteine 1.0 2 1 D aspartate 2.0 4 1 E glutamate 11.7 23 2 F phenylalanine 2.0 4 1 G glycine 7.6 15 2 H histidine 3.0 6 2 I isoleucine 4.6 9 2 K lysine 6.6 13 1 L leucine 8.6 17 2 M methionine 2.0 4 1 N asparagine 2.5 5 1 P proline 4.6 9 2 Q glutamine 5.1 10 2 R arginine 8.1 16 2 S serine 6.6 13 3 T threonine 3.0 6 1 V valine 9.6 19 2 W tryptophan 0.0 0 0 Y tyrosine 2.0 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lin-7 homolog C LIN7B 0.867 lin-7 homolog B LIN7A 0.814 lin-7 homolog A DLG2 0.169 chapsyn-110 isoform 3 DLG2 0.169 chapsyn-110 isoform 1 DLG2 0.169 chapsyn-110 isoform 2 DLG3 0.158 synapse-associated protein 102 isoform a DLG3 0.158 synapse-associated protein 102 isoform b DLG4 0.147 post-synaptic density protein 95 isoform 1 DLG4 0.147 post-synaptic density protein 95 isoform 2 DLG1 0.142 discs, large homolog 1 isoform 1 DLG1 0.142 discs, large homolog 1 isoform 2 GOPC 0.136 golgi associated PDZ and coiled-coil motif containing... GOPC 0.136 golgi associated PDZ and coiled-coil motif containin... MPDZ 0.128 multiple PDZ domain protein MAGI1 0.128 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.128 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.128 membrane associated guanylate kinase, WW and PDZ dom... SNX27 0.122 sorting nexin family member 27 PTPN13 0.122 protein tyrosine phosphatase, non-receptor type 13 is... SNTB2 0.119 basic beta 2 syntrophin PTPN13 0.117 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.117 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.117 protein tyrosine phosphatase, non-receptor type 13 i... PDZD11 0.114 PDZ domain containing 11 INADL 0.114 InaD-like MAGI2 0.111 membrane associated guanylate kinase, WW and PDZ dom... PARD3 0.111 partitioning-defective protein 3 homolog SCRIB 0.111 scribble isoform b SCRIB 0.111 scribble isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.