SNTA1 29489

Name: SNTA1	Sequence: fasta or formatted (505aa)		NCBI GI: 4507137
Description: acidic alpha 1 syntrophin		Referenced in: PDZ Domain Synapses
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.3 57 2 C cysteine 1.2 6 1 D aspartate 4.8 24 2 E glutamate 6.5 33 1 F phenylalanine 2.6 13 1 G glycine 8.9 45 2 H histidine 1.8 9 1 I isoleucine 3.2 16 2 K lysine 4.6 23 2 L leucine 12.1 61 3 M methionine 1.2 6 1 N asparagine 1.6 8 1 P proline 7.1 36 2 Q glutamine 4.4 22 1 R arginine 6.1 31 3 S serine 8.3 42 2 T threonine 6.3 32 1 V valine 5.5 28 2 W tryptophan 1.4 7 1 Y tyrosine 1.2 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 acidic alpha 1 syntrophin SNTB1 0.483 basic beta 1 syntrophin SNTB2 0.414 basic beta 2 syntrophin SNTG2 0.131 syntrophin, gamma 2 SNTG1 0.098 syntrophin, gamma 1 GOPC 0.054 golgi associated PDZ and coiled-coil motif containing... GOPC 0.054 golgi associated PDZ and coiled-coil motif containin... MPDZ 0.040 multiple PDZ domain protein GRIP2 0.040 glutamate receptor interacting protein 2 SCRIB 0.038 scribble isoform b SCRIB 0.038 scribble isoform a LIN7B 0.037 lin-7 homolog B LIN7C 0.036 lin-7 homolog C LIN7A 0.036 lin-7 homolog A GRIP1 0.035 glutamate receptor interacting protein 1 DLG4 0.035 post-synaptic density protein 95 isoform 1 DLG4 0.035 post-synaptic density protein 95 isoform 2 DFNB31 0.035 CASK-interacting protein CIP98 isoform 1 DLG1 0.034 discs, large homolog 1 isoform 1 DLG1 0.034 discs, large homolog 1 isoform 2 DLG3 0.034 synapse-associated protein 102 isoform a MAGI1 0.034 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.034 membrane associated guanylate kinase, WW and PDZ dom... LNX1 0.033 ligand of numb-protein X 1 isoform a LNX1 0.033 ligand of numb-protein X 1 isoform b DLG3 0.033 synapse-associated protein 102 isoform b INADL 0.033 InaD-like MAGI2 0.033 membrane associated guanylate kinase, WW and PDZ dom... DLG2 0.033 chapsyn-110 isoform 1 DLG2 0.033 chapsyn-110 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.