DFNB31 3677

Name: DFNB31	Sequence: fasta or formatted (907aa)		NCBI GI: 140561024
Description: CASK-interacting protein CIP98 isoform 1		Referenced in: Auditory and Vestibular Functions PDZ Domain
Other entries for this name: alt prot [524aa] CASK-interacting protein CIP98 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 71 2 C cysteine 0.4 4 1 D aspartate 4.5 41 2 E glutamate 5.6 51 2 F phenylalanine 1.9 17 1 G glycine 10.5 95 5 H histidine 3.0 27 1 I isoleucine 3.2 29 2 K lysine 3.5 32 2 L leucine 11.5 104 2 M methionine 1.1 10 1 N asparagine 3.2 29 1 P proline 7.3 66 3 Q glutamine 4.0 36 2 R arginine 7.2 65 2 S serine 10.1 92 4 T threonine 6.1 55 2 V valine 6.8 62 1 W tryptophan 0.3 3 1 Y tyrosine 2.0 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CASK-interacting protein CIP98 isoform 1 DFNB31 0.575 CASK-interacting protein CIP98 isoform 2 PDZD7 0.080 PDZ domain containing 7 USH1C 0.066 harmonin isoform b3 USH1C 0.066 harmonin isoform a DLG4 0.033 post-synaptic density protein 95 isoform 1 DLG4 0.033 post-synaptic density protein 95 isoform 2 DLG1 0.033 discs, large homolog 1 isoform 1 DLG1 0.033 discs, large homolog 1 isoform 2 DLG2 0.032 chapsyn-110 isoform 3 DLG3 0.031 synapse-associated protein 102 isoform a RAPGEF6 0.030 PDZ domain-containing guanine nucleotide exchange fa... DLG2 0.029 chapsyn-110 isoform 1 DLG2 0.029 chapsyn-110 isoform 2 SCRIB 0.028 scribble isoform b SCRIB 0.028 scribble isoform a SLC9A3R1 0.027 sodium/hydrogen exchanger regulatory factor 1 PDZRN3 0.027 PDZ domain containing ring finger 3 LOC100133567 0.025 PREDICTED: similar to Rap guanine nucleotide exchan... RAPGEF2 0.025 Rap guanine nucleotide exchange factor 2 MPDZ 0.025 multiple PDZ domain protein INADL 0.023 InaD-like GOPC 0.023 golgi associated PDZ and coiled-coil motif containing... GOPC 0.023 golgi associated PDZ and coiled-coil motif containin... GRID2IP 0.022 glutamate receptor, ionotropic, delta 2 (Grid2) int... MAGI1 0.022 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.022 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.022 membrane associated guanylate kinase, WW and PDZ dom... PDZD11 0.022 PDZ domain containing 11 LNX1 0.022 ligand of numb-protein X 1 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.