LIN7B 1560

Name: LIN7B	Sequence: fasta or formatted (207aa)		NCBI GI: 11545920
Description: lin-7 homolog B		Referenced in: PDZ Domain
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 20 2 C cysteine 0.5 1 1 D aspartate 2.9 6 1 E glutamate 10.1 21 2 F phenylalanine 1.9 4 1 G glycine 8.2 17 2 H histidine 2.9 6 1 I isoleucine 3.4 7 1 K lysine 4.3 9 1 L leucine 10.6 22 2 M methionine 1.9 4 1 N asparagine 1.4 3 1 P proline 3.9 8 2 Q glutamine 6.3 13 2 R arginine 9.7 20 3 S serine 7.7 16 2 T threonine 3.4 7 1 V valine 8.7 18 2 W tryptophan 0.0 0 0 Y tyrosine 2.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lin-7 homolog B LIN7C 0.830 lin-7 homolog C LIN7A 0.771 lin-7 homolog A DLG2 0.170 chapsyn-110 isoform 1 DLG2 0.170 chapsyn-110 isoform 2 DLG2 0.168 chapsyn-110 isoform 3 DLG3 0.157 synapse-associated protein 102 isoform b DLG3 0.157 synapse-associated protein 102 isoform a DLG4 0.146 post-synaptic density protein 95 isoform 1 DLG4 0.146 post-synaptic density protein 95 isoform 2 DLG1 0.141 discs, large homolog 1 isoform 1 DLG1 0.141 discs, large homolog 1 isoform 2 GOPC 0.130 golgi associated PDZ and coiled-coil motif containing... GOPC 0.130 golgi associated PDZ and coiled-coil motif containin... MPDZ 0.128 multiple PDZ domain protein MAGI1 0.120 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.120 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.120 membrane associated guanylate kinase, WW and PDZ dom... PTPN13 0.117 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.117 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.117 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.117 protein tyrosine phosphatase, non-receptor type 13 is... SNX27 0.117 sorting nexin family member 27 INADL 0.112 InaD-like PARD3 0.112 partitioning-defective protein 3 homolog PDZD11 0.112 PDZ domain containing 11 SNTB2 0.112 basic beta 2 syntrophin SCRIB 0.106 scribble isoform b SCRIB 0.106 scribble isoform a PDZD7 0.106 PDZ domain containing 7 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.