SNTB1 1066

Name: SNTB1	Sequence: fasta or formatted (538aa)		NCBI GI: 11321640
Description: basic beta 1 syntrophin		Referenced in: PDZ Domain Synapses
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.0 54 7 C cysteine 1.1 6 1 D aspartate 4.5 24 2 E glutamate 6.3 34 2 F phenylalanine 2.6 14 1 G glycine 9.3 50 3 H histidine 3.0 16 1 I isoleucine 5.8 31 2 K lysine 6.1 33 2 L leucine 9.1 49 2 M methionine 1.5 8 1 N asparagine 2.2 12 1 P proline 5.8 31 3 Q glutamine 3.7 20 1 R arginine 5.8 31 2 S serine 8.6 46 2 T threonine 5.6 30 2 V valine 5.8 31 2 W tryptophan 1.3 7 1 Y tyrosine 2.0 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 basic beta 1 syntrophin SNTB2 0.536 basic beta 2 syntrophin SNTA1 0.449 acidic alpha 1 syntrophin SNTG2 0.125 syntrophin, gamma 2 SNTG1 0.086 syntrophin, gamma 1 GOPC 0.055 golgi associated PDZ and coiled-coil motif containing... GOPC 0.055 golgi associated PDZ and coiled-coil motif containin... DLG1 0.043 discs, large homolog 1 isoform 1 DLG1 0.043 discs, large homolog 1 isoform 2 DLG3 0.040 synapse-associated protein 102 isoform a DLG4 0.038 post-synaptic density protein 95 isoform 1 DLG4 0.038 post-synaptic density protein 95 isoform 2 DLG3 0.037 synapse-associated protein 102 isoform b GRIP2 0.037 glutamate receptor interacting protein 2 GRIP1 0.037 glutamate receptor interacting protein 1 LIN7C 0.036 lin-7 homolog C LIN7B 0.036 lin-7 homolog B DLG2 0.035 chapsyn-110 isoform 3 DLG2 0.035 chapsyn-110 isoform 1 DLG2 0.035 chapsyn-110 isoform 2 LIN7A 0.034 lin-7 homolog A MAGI3 0.034 membrane-associated guanylate kinase-related 3 iso... MPDZ 0.033 multiple PDZ domain protein SCRIB 0.033 scribble isoform b SCRIB 0.033 scribble isoform a INADL 0.033 InaD-like MAGI2 0.033 membrane associated guanylate kinase, WW and PDZ dom... NOS1 0.031 nitric oxide synthase 1, neuronal PDZD7 0.031 PDZ domain containing 7 PDZRN3 0.030 PDZ domain containing ring finger 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.