Guide to the Human Genome
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Name: MLL3 Sequence: fasta or formatted (4911aa) NCBI GI: 91718902
Description:

myeloid/lymphoid or mixed-lineage leukemia 3

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
PHD Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3        262           3
 C cysteine            2.6        127           2
 D aspartate           5.5        271           3
 E glutamate           6.5        319           3
 F phenylalanine       2.7        133           2
 G glycine             5.8        287           2
 H histidine           2.4        117           2
 I isoleucine          3.6        179           3
 K lysine              5.7        278           3
 L leucine             7.1        350           3
 M methionine          2.3        111           2
 N asparagine          4.1        200           2
 P proline            10.1        494           6
 Q glutamine           7.1        351           8
 R arginine            5.1        250           2
 S serine             10.2        502           4
 T threonine           5.7        282           2
 V valine              5.6        275           2
 W tryptophan          0.7         36           1
 Y tyrosine            1.8         87           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myeloid/lymphoid or mixed-lineage leukemia 3 
MLL2                  0.106   myeloid/lymphoid or mixed-lineage leukemia 2 
MLL4                  0.016   myeloid/lymphoid or mixed-lineage leukemia 4 
MLL                   0.016   myeloid/lymphoid or mixed-lineage leukemia protein [...
SETD1B                0.011   SET domain containing 1B 
SETD1A                0.010   SET domain containing 1A 
DPF1                  0.007   D4, zinc and double PHD fingers family 1 isoform c ...
DPF1                  0.007   D4, zinc and double PHD fingers family 1 isoform a ...
EZH1                  0.007   enhancer of zeste homolog 1 
EZH2                  0.007   enhancer of zeste 2 isoform b 
EZH2                  0.007   enhancer of zeste 2 isoform a 
PRG4                  0.007   proteoglycan 4 isoform D 
PRG4                  0.007   proteoglycan 4 isoform C 
PRG4                  0.007   proteoglycan 4 isoform B 
PRG4                  0.007   proteoglycan 4 isoform A 
FLJ22184              0.007   PREDICTED: hypothetical protein FLJ22184 
KDM6B                 0.007   lysine (K)-specific demethylase 6B 
DPF1                  0.007   D4, zinc and double PHD fingers family 1 isoform b ...
FLJ22184              0.006   PREDICTED: hypothetical protein FLJ22184 
SETD2                 0.006   SET domain containing 2 
LOC284297             0.006   hypothetical protein LOC284297 
DPF2                  0.006   D4, zinc and double PHD fingers family 2 
MUC2                  0.006   mucin 2 precursor 
ATN1                  0.006   atrophin-1 
ATN1                  0.006   atrophin-1 
NACA                  0.006   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.006   PREDICTED: hypothetical protein LOC80164 
KIAA1522              0.006   hypothetical protein LOC57648 
CREBBP                0.006   CREB binding protein isoform b 
CREBBP                0.006   CREB binding protein isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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