Guide to the Human Genome
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Name: MLL4 Sequence: fasta or formatted (2715aa) NCBI GI: 7662046
Description:

myeloid/lymphoid or mixed-lineage leukemia 4

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
PHD Finger Proteins
Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7        208           4
 C cysteine            2.8         76           2
 D aspartate           4.4        119           2
 E glutamate           7.4        201           4
 F phenylalanine       2.5         68           1
 G glycine             9.4        255           5
 H histidine           2.2         61           2
 I isoleucine          2.1         58           2
 K lysine              4.3        116           2
 L leucine             7.9        215           3
 M methionine          1.4         37           2
 N asparagine          1.4         38           1
 P proline            14.3        387           7
 Q glutamine           4.1        111           5
 R arginine            8.5        232           3
 S serine              7.6        206           3
 T threonine           4.0        108           2
 V valine              5.7        155           3
 W tryptophan          1.0         28           1
 Y tyrosine            1.3         36           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myeloid/lymphoid or mixed-lineage leukemia 4 
MLL                   0.171   myeloid/lymphoid or mixed-lineage leukemia protein [...
MLL3                  0.029   myeloid/lymphoid or mixed-lineage leukemia 3 
MLL2                  0.028   myeloid/lymphoid or mixed-lineage leukemia 2 
SETD1B                0.027   SET domain containing 1B 
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
SETD1A                0.023   SET domain containing 1A 
NACA                  0.019   nascent polypeptide-associated complex alpha subuni...
RAPH1                 0.018   Ras association and pleckstrin homology domains 1 is...
MUC2                  0.018   mucin 2 precursor 
FLJ22184              0.017   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.017   PREDICTED: hypothetical protein LOC80164 
TTN                   0.016   titin isoform N2-A 
WIPF3                 0.016   WAS/WASL interacting protein family, member 3 [Homo...
PRG4                  0.015   proteoglycan 4 isoform D 
PRG4                  0.015   proteoglycan 4 isoform C 
PRG4                  0.015   proteoglycan 4 isoform B 
PRG4                  0.015   proteoglycan 4 isoform A 
FMN2                  0.015   formin 2 
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 
PRR12                 0.014   proline rich 12 
TAF4                  0.014   TBP-associated factor 4 
BRD4                  0.014   bromodomain-containing protein 4 isoform long 
KDM6B                 0.014   lysine (K)-specific demethylase 6B 
RERE                  0.013   atrophin-1 like protein isoform b 
RERE                  0.013   atrophin-1 like protein isoform a 
RERE                  0.013   atrophin-1 like protein isoform a 
WNK2                  0.013   WNK lysine deficient protein kinase 2 
GLTSCR1               0.013   glioma tumor suppressor candidate region gene 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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