Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 89064750
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89064750 PREDICTED: similar to proteasome 26S ATPase subunit
4 [Homo sapiens]
(414 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89064750 PREDICTED: similar to proteasome 26S ATPase subunit ... 815 0.0
gi|5729991 proteasome 26S ATPase subunit 4 isoform 1 [Homo sapiens] 800 0.0
gi|24430155 proteasome 26S ATPase subunit 4 isoform 2 [Homo sapi... 724 0.0
gi|24430151 proteasome 26S ATPase subunit 1 [Homo sapiens] 393 e-109
gi|169167838 PREDICTED: similar to hCG2002932 [Homo sapiens] 317 1e-86
gi|239748566 PREDICTED: similar to hCG2002932 [Homo sapiens] 317 1e-86
gi|239742549 PREDICTED: hypothetical protein LOC345645 [Homo sap... 317 1e-86
gi|21361144 proteasome 26S ATPase subunit 3 [Homo sapiens] 316 2e-86
gi|24497435 proteasome 26S ATPase subunit 5 [Homo sapiens] 316 3e-86
gi|195539395 proteasome 26S ATPase subunit 6 [Homo sapiens] 306 3e-83
gi|4506209 proteasome 26S ATPase subunit 2 [Homo sapiens] 285 5e-77
gi|157671927 spermatogenesis associated 5 [Homo sapiens] 223 2e-58
gi|6005942 valosin-containing protein [Homo sapiens] 195 6e-50
gi|5802970 AFG3 ATPase family gene 3-like 2 [Homo sapiens] 186 3e-47
gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens] 185 6e-47
gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens] 185 6e-47
gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens] 174 1e-43
gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens] 170 2e-42
gi|4505725 peroxin1 [Homo sapiens] 157 1e-38
gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens] 157 2e-38
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 155 6e-38
gi|21327685 YME1-like 1 isoform 1 [Homo sapiens] 152 7e-37
gi|7657689 YME1-like 1 isoform 3 [Homo sapiens] 152 7e-37
gi|31742536 fidgetin-like 1 [Homo sapiens] 151 1e-36
gi|112789543 fidgetin-like 1 [Homo sapiens] 151 1e-36
gi|153792536 ATPase family, AAA domain containing 2B [Homo sapiens] 150 3e-36
gi|5901990 katanin p60 subunit A 1 [Homo sapiens] 144 1e-34
gi|62177112 katanin p60 subunit A-like 1 [Homo sapiens] 143 3e-34
gi|14149767 katanin p60 subunit A-like 1 [Homo sapiens] 143 3e-34
gi|17865802 vacuolar protein sorting factor 4B [Homo sapiens] 138 1e-32
>gi|89064750 PREDICTED: similar to proteasome 26S ATPase subunit 4
[Homo sapiens]
Length = 414
Score = 815 bits (2106), Expect = 0.0
Identities = 414/414 (100%), Positives = 414/414 (100%)
Query: 1 MIPWHEAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDE 60
MIPWHEAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDE
Sbjct: 1 MIPWHEAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDE 60
Query: 61 QKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELL 120
QKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELL
Sbjct: 61 QKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELL 120
Query: 121 KPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELP 180
KPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELP
Sbjct: 121 KPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELP 180
Query: 181 LTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGP 240
LTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGP
Sbjct: 181 LTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGP 240
Query: 241 RMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVN 300
RMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVN
Sbjct: 241 RMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVN 300
Query: 301 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYV 360
VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYV
Sbjct: 301 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYV 360
Query: 361 ARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 414
ARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
Sbjct: 361 ARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 414
>gi|5729991 proteasome 26S ATPase subunit 4 isoform 1 [Homo sapiens]
Length = 418
Score = 800 bits (2067), Expect = 0.0
Identities = 408/409 (99%), Positives = 409/409 (100%)
Query: 6 EAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLK 65
+AQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLK
Sbjct: 10 KAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLK 69
Query: 66 KEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNAS 125
KEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNAS
Sbjct: 70 KEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNAS 129
Query: 126 VALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE 185
VALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE
Sbjct: 130 VALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE 189
Query: 186 LYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRD 245
LYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRD
Sbjct: 190 LYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRD 249
Query: 246 VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 305
VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM
Sbjct: 250 VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 309
Query: 306 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK 365
ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK
Sbjct: 310 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK 369
Query: 366 ISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 414
ISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
Sbjct: 370 ISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>gi|24430155 proteasome 26S ATPase subunit 4 isoform 2 [Homo
sapiens]
Length = 387
Score = 724 bits (1869), Expect = 0.0
Identities = 377/409 (92%), Positives = 378/409 (92%), Gaps = 31/409 (7%)
Query: 6 EAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLK 65
+AQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYK
Sbjct: 10 KAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYK------------------------ 45
Query: 66 KEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNAS 125
EEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNAS
Sbjct: 46 -------EEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNAS 98
Query: 126 VALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE 185
VALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE
Sbjct: 99 VALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE 158
Query: 186 LYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRD 245
LYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRD
Sbjct: 159 LYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRD 218
Query: 246 VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 305
VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM
Sbjct: 219 VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 278
Query: 306 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK 365
ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK
Sbjct: 279 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK 338
Query: 366 ISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 414
ISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
Sbjct: 339 ISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 387
>gi|24430151 proteasome 26S ATPase subunit 1 [Homo sapiens]
Length = 440
Score = 393 bits (1009), Expect = e-109
Identities = 187/369 (50%), Positives = 282/369 (76%), Gaps = 2/369 (0%)
Query: 42 KLQQELEFLEVQEEYIKDEQ--KNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIV 99
KL++ ++L ++EE+I++++ K L+++ + +V ++ P+ +G E +D N AIV
Sbjct: 64 KLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIV 123
Query: 100 GSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVM 159
++ GS +YV ILS +D++LL+P SV L+ +A++ VL + D + ++ ++ P
Sbjct: 124 STSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQET 183
Query: 160 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 219
YADIGG+D Q QE++E+VELPLTH E Y+++GI PP+GV++YGPPG GKT+LAKAVA+ T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 220 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 279
+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI TKR+D+ +G +R
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 280 EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 339
E+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 340 IFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAY 399
IF TS+M L+++V L+D + D +SGADI +IC E+G++A+RE R V +DF+K+
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 423
Query: 400 KTVIKKDEQ 408
+ V+ K ++
Sbjct: 424 ENVLYKKQE 432
>gi|169167838 PREDICTED: similar to hCG2002932 [Homo sapiens]
Length = 415
Score = 317 bits (812), Expect = 1e-86
Identities = 157/371 (42%), Positives = 253/371 (68%), Gaps = 18/371 (4%)
Query: 42 KLQQELEFLEVQEEYIKDEQ--KNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIV 99
KL++ ++L + EE+I++++ K L+++ + +V ++ P+ +G E +D N AIV
Sbjct: 51 KLERIKDYLLMVEEFIRNQEQIKLLEEKQEEGRSKVDDLRGTPMSVGNLEEIIDDNHAIV 110
Query: 100 GSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVM 159
++ GS +Y I+S ++++LL+P S+ L +A++ VL + + M+ ++ P
Sbjct: 111 STSVGSEHYDSIISFVEKDLLEPGCSILLRHKVHAVIGVLMDDTGPLVTMMKVEKAPQET 170
Query: 160 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 219
Y + GG+D Q QE++E++ELPL H E Y+++G PP+GV++ GPPG
Sbjct: 171 YVNTGGLDNQIQEIKESMELPLPHPEYYEEMGTKPPKGVILCGPPG-------------- 216
Query: 220 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 279
TA F+RVVGSE +QKYLG+GP++VR VF++A+E+AP+I+F DEI+AI TKR+D+ +G +R
Sbjct: 217 TATFLRVVGSELIQKYLGDGPKLVRQVFQVAEEHAPSIMFTDEIEAIGTKRYDSNSGGER 276
Query: 280 EVQRILLEL--LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 337
E+Q+ +LEL LNQ+ GFD +VKVIMAT + +TLDP L+RPGR+D+KIEF LPD + K
Sbjct: 277 EIQQTMLELELLNQLGGFDSREDVKVIMATKQVETLDPVLIRPGRIDKKIEFHLPDEKTK 336
Query: 338 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 397
+ IF TS+M L+ +V L+D + D SGADI +IC E+G++A+RE+R +DF+K
Sbjct: 337 KHIFQIHTSRMTLANDVTLDDLIMAKDDFSGADIKAICTEAGLMALREHRMKATNEDFKK 396
Query: 398 AYKTVIKKDEQ 408
+ ++V+ K +
Sbjct: 397 SIESVLYKKHE 407
>gi|239748566 PREDICTED: similar to hCG2002932 [Homo sapiens]
Length = 415
Score = 317 bits (812), Expect = 1e-86
Identities = 157/371 (42%), Positives = 253/371 (68%), Gaps = 18/371 (4%)
Query: 42 KLQQELEFLEVQEEYIKDEQ--KNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIV 99
KL++ ++L + EE+I++++ K L+++ + +V ++ P+ +G E +D N AIV
Sbjct: 51 KLERIKDYLLMVEEFIRNQEQIKLLEEKQEEGRSKVDDLRGTPMSVGNLEEIIDDNHAIV 110
Query: 100 GSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVM 159
++ GS +Y I+S ++++LL+P S+ L +A++ VL + + M+ ++ P
Sbjct: 111 STSVGSEHYDSIISFVEKDLLEPGCSILLRHKVHAVIGVLMDDTGPLVTMMKVEKAPQET 170
Query: 160 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 219
Y + GG+D Q QE++E++ELPL H E Y+++G PP+GV++ GPPG
Sbjct: 171 YVNTGGLDNQIQEIKESMELPLPHPEYYEEMGTKPPKGVILCGPPG-------------- 216
Query: 220 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 279
TA F+RVVGSE +QKYLG+GP++VR VF++A+E+AP+I+F DEI+AI TKR+D+ +G +R
Sbjct: 217 TATFLRVVGSELIQKYLGDGPKLVRQVFQVAEEHAPSIMFTDEIEAIGTKRYDSNSGGER 276
Query: 280 EVQRILLEL--LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 337
E+Q+ +LEL LNQ+ GFD +VKVIMAT + +TLDP L+RPGR+D+KIEF LPD + K
Sbjct: 277 EIQQTMLELELLNQLGGFDSREDVKVIMATKQVETLDPVLIRPGRIDKKIEFHLPDEKTK 336
Query: 338 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 397
+ IF TS+M L+ +V L+D + D SGADI +IC E+G++A+RE+R +DF+K
Sbjct: 337 KHIFQIHTSRMTLANDVTLDDLIMAKDDFSGADIKAICTEAGLMALREHRMKATNEDFKK 396
Query: 398 AYKTVIKKDEQ 408
+ ++V+ K +
Sbjct: 397 SIESVLYKKHE 407
>gi|239742549 PREDICTED: hypothetical protein LOC345645 [Homo
sapiens]
Length = 415
Score = 317 bits (812), Expect = 1e-86
Identities = 157/371 (42%), Positives = 253/371 (68%), Gaps = 18/371 (4%)
Query: 42 KLQQELEFLEVQEEYIKDEQ--KNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIV 99
KL++ ++L + EE+I++++ K L+++ + +V ++ P+ +G E +D N AIV
Sbjct: 51 KLERIKDYLLMVEEFIRNQEQIKLLEEKQEEGRSKVDDLRGTPMSVGNLEEIIDDNHAIV 110
Query: 100 GSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVM 159
++ GS +Y I+S ++++LL+P S+ L +A++ VL + + M+ ++ P
Sbjct: 111 STSVGSEHYDSIISFVEKDLLEPGCSILLRHKVHAVIGVLMDDTGPLVTMMKVEKAPQET 170
Query: 160 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 219
Y + GG+D Q QE++E++ELPL H E Y+++G PP+GV++ GPPG
Sbjct: 171 YVNTGGLDNQIQEIKESMELPLPHPEYYEEMGTKPPKGVILCGPPG-------------- 216
Query: 220 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 279
TA F+RVVGSE +QKYLG+GP++VR VF++A+E+AP+I+F DEI+AI TKR+D+ +G +R
Sbjct: 217 TATFLRVVGSELIQKYLGDGPKLVRQVFQVAEEHAPSIMFTDEIEAIGTKRYDSNSGGER 276
Query: 280 EVQRILLEL--LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 337
E+Q+ +LEL LNQ+ GFD +VKVIMAT + +TLDP L+RPGR+D+KIEF LPD + K
Sbjct: 277 EIQQTMLELELLNQLGGFDSREDVKVIMATKQVETLDPVLIRPGRIDKKIEFHLPDEKTK 336
Query: 338 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 397
+ IF TS+M L+ +V L+D + D SGADI +IC E+G++A+RE+R +DF+K
Sbjct: 337 KHIFQIHTSRMTLANDVTLDDLIMAKDDFSGADIKAICTEAGLMALREHRMKATNEDFKK 396
Query: 398 AYKTVIKKDEQ 408
+ ++V+ K +
Sbjct: 397 SIESVLYKKHE 407
>gi|21361144 proteasome 26S ATPase subunit 3 [Homo sapiens]
Length = 439
Score = 316 bits (810), Expect = 2e-86
Identities = 159/400 (39%), Positives = 246/400 (61%), Gaps = 20/400 (5%)
Query: 34 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 93
E++ R + L E++ ++ + + E + +K + E++K +++P ++ +E +D
Sbjct: 39 EEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLD 98
Query: 94 QNT--------------------AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSN 133
+ A++ ++T Y++ ++ +D E LKP V ++K S
Sbjct: 99 VDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 158
Query: 134 ALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGID 193
+++ LP E DS + + D++P Y+DIGG+D Q QE+ EA+ LP+ H E ++ +GI
Sbjct: 159 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 218
Query: 194 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN 253
PP+GVLMYGPPG GKT+LA+A A T A F+++ G + VQ ++G+G ++VRD F LAKE
Sbjct: 219 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 278
Query: 254 APAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTL 313
AP+IIFIDE+DAI TKRFD++ DREVQR +LELLNQ+DGF N VKVI ATNR D L
Sbjct: 279 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 338
Query: 314 DPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINS 373
DPALLR GRLDRKIEFP+P+ + I + KMN+S +V+ E+ D +GA +
Sbjct: 339 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 398
Query: 374 ICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 413
+C E+GM+A+R + +D+ + V K + ++Y
Sbjct: 399 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYY 438
>gi|24497435 proteasome 26S ATPase subunit 5 [Homo sapiens]
Length = 406
Score = 316 bits (809), Expect = 3e-86
Identities = 170/396 (42%), Positives = 247/396 (62%), Gaps = 14/396 (3%)
Query: 27 GPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQ------------EE 74
GPE +LE+ + Q L +E + + D+ +NL++ L AQ EE
Sbjct: 5 GPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRR--LQAQRNELNAKVRLLREE 62
Query: 75 VKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNA 134
++ +Q +G+ + A+D+ +V + V + ID + PN VAL S
Sbjct: 63 LQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYT 122
Query: 135 LVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 194
L +LP + D + ++ ++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI
Sbjct: 123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182
Query: 195 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 254
P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A+E+A
Sbjct: 183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242
Query: 255 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 314
P+IIF+DEID+I + R + +G D EVQR +LELLNQ+DGF+ N+KVIMATNR D LD
Sbjct: 243 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 315 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 374
ALLRPGR+DRKIEFP P+ + I + KMNL+ ++L SGA++ +
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362
Query: 375 CQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 410
C E+GM A+RE R V +DFE A V++KD +++
Sbjct: 363 CTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 398
>gi|195539395 proteasome 26S ATPase subunit 6 [Homo sapiens]
Length = 403
Score = 306 bits (783), Expect = 3e-83
Identities = 158/382 (41%), Positives = 241/382 (63%), Gaps = 4/382 (1%)
Query: 28 PEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQ 87
P + L+D Y+K E + ++ + + ++++ K L K++ ++ ++K +QS+ ++G+
Sbjct: 18 PRDKALQD----YRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGE 73
Query: 88 FLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSI 147
L+ + + IV +T G Y V +D+ LKP VAL + ++ LP E D +
Sbjct: 74 VLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLV 133
Query: 148 MMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCG 207
++ + +V Y++IGG+ Q +E+RE +ELPLT+ EL++++GI PP+G L+YGPPG G
Sbjct: 134 YNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTG 193
Query: 208 KTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIA 267
KT+LA+AVA F++VV S V KY+GE R++R++F A+++ P IIF+DEIDAI
Sbjct: 194 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 253
Query: 268 TKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKI 327
+RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 254 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 313
Query: 328 EFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENR 387
LP+ + + I + E+D E V D +GAD+ ++C E+GM A+R +
Sbjct: 314 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 373
Query: 388 YIVLAKDFEKAYKTVIKKDEQE 409
V+ +DF KA + V + E
Sbjct: 374 DFVVQEDFMKAVRKVADSKKLE 395
>gi|4506209 proteasome 26S ATPase subunit 2 [Homo sapiens]
Length = 433
Score = 285 bits (729), Expect = 5e-77
Identities = 140/266 (52%), Positives = 184/266 (69%)
Query: 139 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGV 198
LPP+ D ++ M+ ++KPDV Y+D+GG Q +++RE VE PL H E + +GI+PP+GV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 199 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 258
L++GPPG GKT+ A+AVA+ T A FIRV+GSE VQKY+GEG RMVR++F +A+ +I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 259 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALL 318
F DEIDAI RFD G D EVQR +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 319 RPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQES 378
RPGRLDRKIEF LPD + IF M++ ++ E +GA+I S+C E+
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 379 GMLAVRENRYIVLAKDFEKAYKTVIK 404
GM A+R R I KDF +A VIK
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVIK 418
>gi|157671927 spermatogenesis associated 5 [Homo sapiens]
Length = 893
Score = 223 bits (568), Expect = 2e-58
Identities = 120/292 (41%), Positives = 183/292 (62%), Gaps = 9/292 (3%)
Query: 126 VALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE 185
+ L A+ D+ P S M + P+V ++DIGG++ K ++ +AVE PL H E
Sbjct: 597 ITLKDFLQAMNDIRP-----SAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPE 651
Query: 186 LYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRD 245
+ ++GI PP+GVL+YGPPGC KTM+AKA+A+ + F+ + G E + KY+GE R VR+
Sbjct: 652 SFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 711
Query: 246 VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 305
FR A+ AP+IIF DE+DA+A +R + GA R+L +LL +MDG +Q +V ++
Sbjct: 712 TFRKARAVAPSIIFFDELDALAVER-GSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILA 770
Query: 306 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK 365
ATNR D +D AL+RPGR+DR I PLPD +R IF M +S EVDL++ + + D
Sbjct: 771 ATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDA 830
Query: 366 ISGADINSICQESGMLAVREN--RYIVLAKDFEKAYKTVIKK-DEQEHEFYK 414
SGA+I ++C+E+ +LA+ E+ +++ + F +A TV + E FY+
Sbjct: 831 YSGAEIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYE 882
Score = 162 bits (410), Expect = 5e-40
Identities = 95/236 (40%), Positives = 135/236 (57%), Gaps = 7/236 (2%)
Query: 153 DQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 212
D + V Y IGG+ Q + +RE +ELPL EL+K GI PRGVL+YGPPG GKTM+A
Sbjct: 345 DNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIA 404
Query: 213 KAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 272
+AVA+ A + G E + K+ GE +R +F A P+IIFIDE+DA+ KR
Sbjct: 405 RAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREG 464
Query: 273 AQTGADREVQRILLELLNQMDGFDQNVN---VKVIMATNRADTLDPALLRPGRLDRKIEF 329
AQ ++ R++ LL MDG V+ V V+ ATNR LD AL RPGR D++IE
Sbjct: 465 AQNEVEK---RVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521
Query: 330 PLPDRRQKRLIFSTITSKM-NLSEEVDLEDYVARPDKISGADINSICQESGMLAVR 384
+P+ + + I + ++ +L E +L GAD+ +C E+G+ A+R
Sbjct: 522 GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALR 577
>gi|6005942 valosin-containing protein [Homo sapiens]
Length = 806
Score = 195 bits (496), Expect = 6e-50
Identities = 98/245 (40%), Positives = 150/245 (61%)
Query: 142 EADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMY 201
+++ S + T + P V + DIGG++ K+E++E V+ P+ H + + + G+ P +GVL Y
Sbjct: 458 QSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFY 517
Query: 202 GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFID 261
GPPGCGKT+LAKA+A+ A FI + G E + + GE VR++F A++ AP ++F D
Sbjct: 518 GPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFD 577
Query: 262 EIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPG 321
E+D+IA R R++ ++L +MDG NV +I ATNR D +DPA+LRPG
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 322 RLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGML 381
RLD+ I PLPD + + I K ++++VDLE + SGAD+ ICQ + L
Sbjct: 638 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 697
Query: 382 AVREN 386
A+RE+
Sbjct: 698 AIRES 702
Score = 195 bits (495), Expect = 7e-50
Identities = 104/238 (43%), Positives = 148/238 (62%), Gaps = 3/238 (1%)
Query: 157 DVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 216
+V Y DIGG Q +++E VELPL H L+K IG+ PPRG+L+YGPPG GKT++A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 217 HHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 276
+ T A F + G E + K GE +R F A++NAPAIIFIDE+DAIA KR
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGE 319
Query: 277 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 336
+R RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++ +PD
Sbjct: 320 VER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 337 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKD 394
+ I T M L+++VDLE GAD+ ++C E+ + A+R+ ++ +D
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
>gi|5802970 AFG3 ATPase family gene 3-like 2 [Homo sapiens]
Length = 797
Score = 186 bits (472), Expect = 3e-47
Identities = 104/252 (41%), Positives = 148/252 (58%), Gaps = 7/252 (2%)
Query: 157 DVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 216
DV + D+ G + K E+ E V L + + Y+ +G P+G ++ GPPG GKT+LAKA A
Sbjct: 304 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 362
Query: 217 HHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 276
FI V GSEF++ ++G GP VRD+F LA++NAP I+FIDEIDA+ KR G
Sbjct: 363 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 422
Query: 277 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 336
E + L +LL +MDGF+ NV ++ TNR D LDPALLRPGR DR+I PD +
Sbjct: 423 GQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKG 482
Query: 337 KRLIFSTITSKMNLSEEVDLEDYVAR-----PDKISGADINSICQESGMLAVRENRYIVL 391
+ IF + L ++ +D +AR SGAD+ ++C E+ ++A R +
Sbjct: 483 RASIFKVHLRPLKLDSTLE-KDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSIN 541
Query: 392 AKDFEKAYKTVI 403
K FE+A + VI
Sbjct: 542 QKHFEQAIERVI 553
>gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens]
Length = 750
Score = 185 bits (470), Expect = 6e-47
Identities = 108/276 (39%), Positives = 166/276 (60%), Gaps = 23/276 (8%)
Query: 156 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 215
P+V +ADIG ++ ++E+ A+ P+ + + +K +G+ P GVL+ GPPGCGKT+LAKAV
Sbjct: 470 PNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAV 529
Query: 216 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 275
A+ + FI V G E + Y+GE R VR VF+ AK +AP +IF DE+DA+ +R D +T
Sbjct: 530 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 589
Query: 276 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 335
GA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ + LP
Sbjct: 590 GAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA 646
Query: 336 QKRLIFSTIT---SKMNLSEEVDLEDYVA--RPDKISGADINSICQESGMLAVRE----- 385
+ I TIT +K L +V+LE R D +GAD++++ +E+ + A+R+
Sbjct: 647 DRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQ 706
Query: 386 ------NRYIVLAKDFEKAYK----TVIKKDEQEHE 411
V K FE+A+K ++ KKD+ +E
Sbjct: 707 KSGNEKGELKVSHKHFEEAFKKVRSSISKKDQIMYE 742
Score = 167 bits (424), Expect = 1e-41
Identities = 94/244 (38%), Positives = 139/244 (56%), Gaps = 3/244 (1%)
Query: 154 QKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAK 213
Q +V + D+GG D+ +EV + + + + H E+Y +G+ PPRGVL++GPPGCGKT+LA
Sbjct: 152 QISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 210
Query: 214 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 273
A+A ++V E V GE + +R++F A NAP IIFIDEIDAI KR A
Sbjct: 211 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVA 270
Query: 274 QTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 333
+R + LL ++ ++ V VI ATNR D+LDPAL R GR DR+I +PD
Sbjct: 271 SKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 330
Query: 334 RRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAK 393
+ I T+ K+ L + D GAD+ ++C+E+ M AV NR ++ +
Sbjct: 331 EASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV--NRVLMKLQ 388
Query: 394 DFEK 397
+ +K
Sbjct: 389 EQQK 392
>gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens]
Length = 856
Score = 185 bits (470), Expect = 6e-47
Identities = 108/276 (39%), Positives = 166/276 (60%), Gaps = 23/276 (8%)
Query: 156 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 215
P+V +ADIG ++ ++E+ A+ P+ + + +K +G+ P GVL+ GPPGCGKT+LAKAV
Sbjct: 576 PNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAV 635
Query: 216 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 275
A+ + FI V G E + Y+GE R VR VF+ AK +AP +IF DE+DA+ +R D +T
Sbjct: 636 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 695
Query: 276 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 335
GA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ + LP
Sbjct: 696 GAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA 752
Query: 336 QKRLIFSTIT---SKMNLSEEVDLEDYVA--RPDKISGADINSICQESGMLAVRE----- 385
+ I TIT +K L +V+LE R D +GAD++++ +E+ + A+R+
Sbjct: 753 DRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQ 812
Query: 386 ------NRYIVLAKDFEKAYK----TVIKKDEQEHE 411
V K FE+A+K ++ KKD+ +E
Sbjct: 813 KSGNEKGELKVSHKHFEEAFKKVRSSISKKDQIMYE 848
Score = 167 bits (424), Expect = 1e-41
Identities = 94/244 (38%), Positives = 139/244 (56%), Gaps = 3/244 (1%)
Query: 154 QKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAK 213
Q +V + D+GG D+ +EV + + + + H E+Y +G+ PPRGVL++GPPGCGKT+LA
Sbjct: 258 QISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 316
Query: 214 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 273
A+A ++V E V GE + +R++F A NAP IIFIDEIDAI KR A
Sbjct: 317 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVA 376
Query: 274 QTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 333
+R + LL ++ ++ V VI ATNR D+LDPAL R GR DR+I +PD
Sbjct: 377 SKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 436
Query: 334 RRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAK 393
+ I T+ K+ L + D GAD+ ++C+E+ M AV NR ++ +
Sbjct: 437 EASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV--NRVLMKLQ 494
Query: 394 DFEK 397
+ +K
Sbjct: 495 EQQK 498
>gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens]
Length = 753
Score = 174 bits (441), Expect = 1e-43
Identities = 104/286 (36%), Positives = 167/286 (58%), Gaps = 25/286 (8%)
Query: 139 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGV 198
+ P + S++ L D KP V + +IGG++ K ++++++E PL + ++G+ P+GV
Sbjct: 444 IQPSSFRSVIGLM-DIKP-VDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGV 501
Query: 199 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 258
L+YGPPGC KT L +A+A +F+ V G++ ++G+ +++ +FR A+ + PAI+
Sbjct: 502 LLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAIL 561
Query: 259 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDG-----------------FDQ--NV 299
F+DEID+I R ++TG D + +R+L LLN++DG F + N
Sbjct: 562 FLDEIDSILGARSASKTGCDVQ-ERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNR 620
Query: 300 NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDY 359
+V +I ATNR D LD ALLRPGRLD+ I P PD + + I T M + +V LE+
Sbjct: 621 SVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENL 680
Query: 360 VARPDKISGADINSICQESGMLAVREN---RYIVLAKDFEKAYKTV 402
A SGAD+ ++C E+ +LA++EN V + F K+ KTV
Sbjct: 681 AAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLKTV 726
Score = 145 bits (366), Expect = 7e-35
Identities = 88/248 (35%), Positives = 134/248 (54%), Gaps = 13/248 (5%)
Query: 163 IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 222
+GG+ +RE + LPL + +G+ PRGVL+ GPPG GKT L +AVA A
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 223 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA---PAIIFIDEIDAIATKRFDAQTGADR 279
+ V GE VR VF+ A+E A P+++F+DE+DA+ +R G+
Sbjct: 262 LLAVSAPALQGSRPGETEENVRRVFQRARELASRGPSLLFLDEMDALCPQR-----GSRA 316
Query: 280 EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 339
R++ ++L +DG + V V+ ATNR D LDPAL RPGR DR++ P +Q++
Sbjct: 317 PESRVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKE 376
Query: 340 IFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAV-----RENRYIVLAKD 394
I ITSKM +S VDL GAD+ ++C+E+ M A+ ++ ++ D
Sbjct: 377 ILQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAMHALLHSEKNQDNPVIDEID 436
Query: 395 FEKAYKTV 402
F +A+K +
Sbjct: 437 FLEAFKNI 444
>gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens]
Length = 795
Score = 170 bits (430), Expect = 2e-42
Identities = 101/249 (40%), Positives = 143/249 (57%), Gaps = 4/249 (1%)
Query: 158 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 217
V + D+ GM K EVRE V+ L E + Q+G P+G L+ GPPGCGKT+LAKAVA
Sbjct: 306 VSFKDVAGMHEAKLEVREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 218 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG- 276
F+ + G EFV+ G G VR +F+ A+ AP I++IDEIDA+ KR +G
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424
Query: 277 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 336
++ E ++ L +LL +MDG +V V+ +TNRAD LD AL+RPGRLDR + LP ++
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQE 484
Query: 337 KRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKD 394
+R IF + L++ + SGADI +IC E+ + A RE V +
Sbjct: 485 RREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLN 544
Query: 395 FEKAYKTVI 403
FE A + V+
Sbjct: 545 FEYAVERVL 553
>gi|4505725 peroxin1 [Homo sapiens]
Length = 1283
Score = 157 bits (398), Expect = 1e-38
Identities = 83/239 (34%), Positives = 140/239 (58%), Gaps = 3/239 (1%)
Query: 145 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 204
+S+ + + D+ + IGG+ +Q + + ++LP + EL+ + I G+L+YGPP
Sbjct: 824 ASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPP 883
Query: 205 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 264
G GKT+LA +A + FI V G E + KY+G + VRD+F A+ P I+F DE +
Sbjct: 884 GTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFE 943
Query: 265 AIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLD 324
+IA +R TG R++ +LL Q+DG + V V+ AT+R D +DPALLRPGRLD
Sbjct: 944 SIAPRRGHDNTGV---TDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLD 1000
Query: 325 RKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAV 383
+ + P PD+ + I + ++ + L+++VDL+ + D +GAD+ ++ + + A+
Sbjct: 1001 KCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEAL 1059
>gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]
Length = 980
Score = 157 bits (397), Expect = 2e-38
Identities = 93/232 (40%), Positives = 140/232 (60%), Gaps = 7/232 (3%)
Query: 156 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 215
P V + D+GG+ K+E+ E ++LPL H EL +G+ G+L++GPPG GKT+LAKAV
Sbjct: 700 PSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAV 757
Query: 216 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 275
A + F+ V G E + Y+G+ VR+VF A+ AP IIF DE+D++A R ++
Sbjct: 758 ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR--GRS 815
Query: 276 GADREV-QRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 334
G V R++ +LL ++DG +V VI ATNR D LDPALLRPGR D+ + +
Sbjct: 816 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 875
Query: 335 RQKRL-IFSTITSKMNLSEEVDLEDYV-ARPDKISGADINSICQESGMLAVR 384
R +L + S IT K L V L + + P +++GAD+ S+C ++ A++
Sbjct: 876 RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALK 927
Score = 63.5 bits (153), Expect = 3e-10
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 4/185 (2%)
Query: 198 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 257
VL+ GPPGCGKT + A H ++V S + G ++ +F A+ PA+
Sbjct: 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAV 525
Query: 258 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 317
+ + +D + R G D V +L LL D + + V+ T+RA L PA
Sbjct: 526 LLLTAVDLLGRDR--DGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDL-PAD 582
Query: 318 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQE 377
++ ++E P Q+ I +T+ + L +EV+L R D+ ++
Sbjct: 583 VQTA-FPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTH 641
Query: 378 SGMLA 382
S A
Sbjct: 642 SSRAA 646
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 155 bits (392), Expect = 6e-38
Identities = 104/297 (35%), Positives = 152/297 (51%), Gaps = 36/297 (12%)
Query: 134 ALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGID 193
+L DV P + DSS V + +GG+ ++E V PL + E++++ I
Sbjct: 410 SLADVDPMQLDSS-----------VRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQ 458
Query: 194 PPRGVLMYGPPGCGKTMLAKAVAHHTT-----AAFIRVVGSEFVQKYLGEGPRMVRDVFR 248
PPRG L YGPPG GKT++A+A+A+ + AF G++ + K++GE R +R +F
Sbjct: 459 PPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFD 518
Query: 249 LAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATN 308
A + P+IIF DEID +A R Q D+ I+ LL MDG D + VI ATN
Sbjct: 519 QAYQMRPSIIFFDEIDGLAPVRSSRQ---DQIHSSIVSTLLALMDGLDSRGEIVVIGATN 575
Query: 309 RADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSE-EVDLEDYVARPDKIS 367
R D++DPAL RPGR DR+ F LPD+ ++ I T N + LE+
Sbjct: 576 RLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYC 635
Query: 368 GADINSICQESGMLAVRE----------------NRYIVLAKDFEKAYKTVIKKDEQ 408
GADI SIC E+ + A+R + + AKDFE A + +I ++
Sbjct: 636 GADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPASQR 692
>gi|21327685 YME1-like 1 isoform 1 [Homo sapiens]
Length = 773
Score = 152 bits (383), Expect = 7e-37
Identities = 86/255 (33%), Positives = 144/255 (56%), Gaps = 3/255 (1%)
Query: 154 QKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAK 213
Q +V + + G++ KQE++E VE L + + + +G P+G+L+ GPPG GKT+LA+
Sbjct: 332 QMKNVTFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLAR 390
Query: 214 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 273
AVA F GSEF + ++G G +R++FR AK NAP +IFIDE+D++ KR ++
Sbjct: 391 AVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIES 450
Query: 274 QTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 333
++ + +LL +MDGF N V +I ATN + LD AL+RPGR D ++ P PD
Sbjct: 451 P--MHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPD 508
Query: 334 RRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAK 393
+ + I +K+ + VD E SGA++ ++ ++ + A + + +V K
Sbjct: 509 VKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMK 568
Query: 394 DFEKAYKTVIKKDEQ 408
+ E + ++ E+
Sbjct: 569 ELEFSKDKILMGPER 583
>gi|7657689 YME1-like 1 isoform 3 [Homo sapiens]
Length = 716
Score = 152 bits (383), Expect = 7e-37
Identities = 86/255 (33%), Positives = 144/255 (56%), Gaps = 3/255 (1%)
Query: 154 QKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAK 213
Q +V + + G++ KQE++E VE L + + + +G P+G+L+ GPPG GKT+LA+
Sbjct: 275 QMKNVTFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLAR 333
Query: 214 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 273
AVA F GSEF + ++G G +R++FR AK NAP +IFIDE+D++ KR ++
Sbjct: 334 AVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIES 393
Query: 274 QTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 333
++ + +LL +MDGF N V +I ATN + LD AL+RPGR D ++ P PD
Sbjct: 394 P--MHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPD 451
Query: 334 RRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAK 393
+ + I +K+ + VD E SGA++ ++ ++ + A + + +V K
Sbjct: 452 VKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMK 511
Query: 394 DFEKAYKTVIKKDEQ 408
+ E + ++ E+
Sbjct: 512 ELEFSKDKILMGPER 526
>gi|31742536 fidgetin-like 1 [Homo sapiens]
Length = 674
Score = 151 bits (381), Expect = 1e-36
Identities = 95/280 (33%), Positives = 152/280 (54%), Gaps = 23/280 (8%)
Query: 139 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGV 198
L P+ IM D P V + DI G++ K ++E V P+ +++ + PP+G+
Sbjct: 379 LEPKMIELIMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLR-GPPKGI 437
Query: 199 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 258
L++GPPG GKT++ K +A + A F + S K++GEG +MVR +F +A+ PA+I
Sbjct: 438 LLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVI 497
Query: 259 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDG--FDQNVNVKVIMATNRADTLDPA 316
FIDEID++ ++R D + + R RI E L Q+DG + V+ ATNR +D A
Sbjct: 498 FIDEIDSLLSQRGDGEHESSR---RIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEA 554
Query: 317 LLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMN--LSEEVDLEDYVARPDKISGADINSI 374
R RL +++ PLP+ ++ I + SK LSEE ++E V + D SGAD+ +
Sbjct: 555 ARR--RLVKRLYIPLPEASARKQIVINLMSKEQCCLSEE-EIEQIVQQSDAFSGADMTQL 611
Query: 375 CQESGMLAVRENRYIVLAK------------DFEKAYKTV 402
C+E+ + +R + +A DFE A++TV
Sbjct: 612 CREASLGPIRSLQTADIATITPDQVRPIAYIDFENAFRTV 651
>gi|112789543 fidgetin-like 1 [Homo sapiens]
Length = 674
Score = 151 bits (381), Expect = 1e-36
Identities = 95/280 (33%), Positives = 152/280 (54%), Gaps = 23/280 (8%)
Query: 139 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGV 198
L P+ IM D P V + DI G++ K ++E V P+ +++ + PP+G+
Sbjct: 379 LEPKMIELIMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLR-GPPKGI 437
Query: 199 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 258
L++GPPG GKT++ K +A + A F + S K++GEG +MVR +F +A+ PA+I
Sbjct: 438 LLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVI 497
Query: 259 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDG--FDQNVNVKVIMATNRADTLDPA 316
FIDEID++ ++R D + + R RI E L Q+DG + V+ ATNR +D A
Sbjct: 498 FIDEIDSLLSQRGDGEHESSR---RIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEA 554
Query: 317 LLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMN--LSEEVDLEDYVARPDKISGADINSI 374
R RL +++ PLP+ ++ I + SK LSEE ++E V + D SGAD+ +
Sbjct: 555 ARR--RLVKRLYIPLPEASARKQIVINLMSKEQCCLSEE-EIEQIVQQSDAFSGADMTQL 611
Query: 375 CQESGMLAVRENRYIVLAK------------DFEKAYKTV 402
C+E+ + +R + +A DFE A++TV
Sbjct: 612 CREASLGPIRSLQTADIATITPDQVRPIAYIDFENAFRTV 651
>gi|153792536 ATPase family, AAA domain containing 2B [Homo sapiens]
Length = 1458
Score = 150 bits (378), Expect = 3e-36
Identities = 101/280 (36%), Positives = 147/280 (52%), Gaps = 29/280 (10%)
Query: 111 ILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQK 170
+ S I RE +K AS+A DV P D S V + IGG+
Sbjct: 370 LASGILRERVKVGASLA---------DVDPMNIDKS-----------VRFDSIGGLSHHI 409
Query: 171 QEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT-----AAFIR 225
++E V PL + E++++ I PPRG L YGPPG GKT++A+A+A+ + AF
Sbjct: 410 HALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKKVAFFM 469
Query: 226 VVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRIL 285
G++ + K++GE R +R +F A P+IIF DEID +A R Q D+ I+
Sbjct: 470 RKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ---DQIHSSIV 526
Query: 286 LELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTIT 345
LL MDG D + VI ATNR D++DPAL RPGR DR+ F LPD++ ++ I T
Sbjct: 527 STLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHT 586
Query: 346 SKMNLS-EEVDLEDYVARPDKISGADINSICQESGMLAVR 384
N + L + + GADI ++C E+ ++A+R
Sbjct: 587 RDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALR 626
>gi|5901990 katanin p60 subunit A 1 [Homo sapiens]
Length = 491
Score = 144 bits (364), Expect = 1e-34
Identities = 92/239 (38%), Positives = 137/239 (57%), Gaps = 14/239 (5%)
Query: 154 QKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAK 213
Q P+V + DI + K+ ++EAV LP+ E +K I P +GVLM GPPG GKT+LAK
Sbjct: 202 QNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIR-RPWKGVLMVGPPGTGKTLLAK 260
Query: 214 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 273
AVA F V S KY GE ++VR +F +A+ +PA IFIDEID+I ++R
Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR--- 317
Query: 274 QTGADREV-QRILLELLNQMDGF-------DQNVNVKVIMATNRADTLDPALLRPGRLDR 325
T + E +R+ ELL QMDG D + V V+ ATN +D AL R RL++
Sbjct: 318 GTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEK 375
Query: 326 KIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVR 384
+I PLP + + + ++ L+++VDL + SGADI ++C+++ ++A+R
Sbjct: 376 RIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMR 434
>gi|62177112 katanin p60 subunit A-like 1 [Homo sapiens]
Length = 490
Score = 143 bits (360), Expect = 3e-34
Identities = 91/239 (38%), Positives = 136/239 (56%), Gaps = 14/239 (5%)
Query: 154 QKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAK 213
+ P + + DI ++ K+ +REAV LP+ + +K I P +GVLM GPPG GKTMLAK
Sbjct: 201 RNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAK 259
Query: 214 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 273
AVA F V S KY GE ++VR +F +A+ AP IFIDEID+I ++R
Sbjct: 260 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--- 316
Query: 274 QTGADREV-QRILLELLNQMDGF-------DQNVNVKVIMATNRADTLDPALLRPGRLDR 325
T + E +R+ ELL QMDG D + V V+ ATN +D AL R RL++
Sbjct: 317 GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEK 374
Query: 326 KIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVR 384
+I PLP + + + ++ L ++ LED + + SGADI ++C+++ ++A+R
Sbjct: 375 RIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMR 433
>gi|14149767 katanin p60 subunit A-like 1 [Homo sapiens]
Length = 490
Score = 143 bits (360), Expect = 3e-34
Identities = 91/239 (38%), Positives = 136/239 (56%), Gaps = 14/239 (5%)
Query: 154 QKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAK 213
+ P + + DI ++ K+ +REAV LP+ + +K I P +GVLM GPPG GKTMLAK
Sbjct: 201 RNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAK 259
Query: 214 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 273
AVA F V S KY GE ++VR +F +A+ AP IFIDEID+I ++R
Sbjct: 260 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--- 316
Query: 274 QTGADREV-QRILLELLNQMDGF-------DQNVNVKVIMATNRADTLDPALLRPGRLDR 325
T + E +R+ ELL QMDG D + V V+ ATN +D AL R RL++
Sbjct: 317 GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEK 374
Query: 326 KIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVR 384
+I PLP + + + ++ L ++ LED + + SGADI ++C+++ ++A+R
Sbjct: 375 RIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMR 433
>gi|17865802 vacuolar protein sorting factor 4B [Homo sapiens]
Length = 444
Score = 138 bits (347), Expect = 1e-32
Identities = 87/235 (37%), Positives = 139/235 (59%), Gaps = 9/235 (3%)
Query: 154 QKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAK 213
++P+V ++D+ G++ K+ ++EAV LP+ L+ P RG+L++GPPG GK+ LAK
Sbjct: 127 ERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGKSYLAK 185
Query: 214 AVAHHTT-AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 272
AVA + F + S+ V K+LGE ++V+++F+LA+EN P+IIFIDEID++ R +
Sbjct: 186 AVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE 245
Query: 273 AQTGADREVQRILLELLNQMDGFD-QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPL 331
++ A R RI E L QM G N + V+ ATN LD A+ R R +++I PL
Sbjct: 246 NESEAAR---RIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPL 300
Query: 332 PDRRQKRLIFST-ITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRE 385
P+ + +F + + N E D + + D SGADI+ I +++ M VR+
Sbjct: 301 PEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,271,784
Number of Sequences: 37866
Number of extensions: 666904
Number of successful extensions: 3613
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 3231
Number of HSP's gapped (non-prelim): 372
length of query: 414
length of database: 18,247,518
effective HSP length: 105
effective length of query: 309
effective length of database: 14,271,588
effective search space: 4409920692
effective search space used: 4409920692
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.