Guide to the Human Genome
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Name: SLC9A3R1 Sequence: fasta or formatted (358aa) NCBI GI: 4759140
Description:

sodium/hydrogen exchanger regulatory factor 1

Referenced in:

PDZ Domain
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         35           3
 C cysteine            1.4          5           2
 D aspartate           5.3         19           1
 E glutamate          10.1         36           2
 F phenylalanine       2.2          8           2
 G glycine             7.5         27           2
 H histidine           2.2          8           1
 I isoleucine          2.5          9           1
 K lysine              6.1         22           2
 L leucine             8.9         32           2
 M methionine          1.4          5           1
 N asparagine          4.2         15           1
 P proline             7.5         27           2
 Q glutamine           5.3         19           2
 R arginine            6.7         24           1
 S serine              8.7         31           3
 T threonine           2.5          9           1
 V valine              6.4         23           2
 W tryptophan          0.3          1           1
 Y tyrosine            0.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sodium/hydrogen exchanger regulatory factor 1 
SLC9A3R2              0.440   solute carrier family 9 isoform 3 regulator 2 isofo...
SLC9A3R2              0.431   solute carrier family 9 isoform 3 regulator 2 isofor...
PDZK1                 0.199   PDZ domain containing 1 
PDZD3                 0.138   PDZ domain containing 3 
LOC100133863          0.083   PREDICTED: similar to PDZ domain containing 1 [Homo...
PTPN13                0.073   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.073   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.073   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.073   protein tyrosine phosphatase, non-receptor type 13 is...
DLG3                  0.071   synapse-associated protein 102 isoform a 
INADL                 0.068   InaD-like 
DFNB31                0.068   CASK-interacting protein CIP98 isoform 1 
DLG2                  0.067   chapsyn-110 isoform 3 
DLG4                  0.067   post-synaptic density protein 95 isoform 1 
DLG4                  0.067   post-synaptic density protein 95 isoform 2 
DLG1                  0.064   discs, large homolog 1 isoform 1 
DLG1                  0.064   discs, large homolog 1 isoform 2 
MAGI1                 0.064   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.064   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.064   membrane associated guanylate kinase, WW and PDZ dom...
SCRIB                 0.061   scribble isoform b 
SCRIB                 0.061   scribble isoform a 
MAGI3                 0.060   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.060   membrane-associated guanylate kinase-related  3 iso...
USH1C                 0.057   harmonin isoform b3 
USH1C                 0.057   harmonin isoform a 
MPDZ                  0.054   multiple PDZ domain protein 
SNX27                 0.054   sorting nexin family member 27 
SHANK1                0.051   SH3 and multiple ankyrin repeat domains 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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