RAPGEF6 32716

Name: RAPGEF6	Sequence: fasta or formatted (1601aa)		NCBI GI: 54633319
Description: PDZ domain-containing guanine nucleotide exchange factor I		Referenced in: PDZ Domain Ras
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 78 2 C cysteine 1.7 27 1 D aspartate 6.1 98 3 E glutamate 7.6 121 3 F phenylalanine 3.1 49 1 G glycine 5.1 81 2 H histidine 3.2 51 1 I isoleucine 5.5 88 3 K lysine 6.6 105 2 L leucine 9.0 144 2 M methionine 2.6 42 2 N asparagine 4.1 65 2 P proline 5.4 86 3 Q glutamine 4.6 73 2 R arginine 5.3 85 3 S serine 10.9 175 4 T threonine 5.5 88 2 V valine 6.2 99 2 W tryptophan 0.8 13 1 Y tyrosine 2.1 33 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ domain-containing guanine nucleotide exchange fa... RAPGEF2 0.550 Rap guanine nucleotide exchange factor 2 LOC100133567 0.364 PREDICTED: similar to Rap guanine nucleotide exchan... LOC100292648 0.046 PREDICTED: similar to hCG2036828 RAPGEF4 0.044 Rap guanine nucleotide exchange factor (GEF) 4 isof... RAPGEF4 0.044 Rap guanine nucleotide exchange factor (GEF) 4 isof... RAPGEF5 0.043 Rap guanine nucleotide exchange factor (GEF) 5 [Hom... RAPGEF3 0.038 Rap guanine nucleotide exchange factor 3 isoform b ... RAPGEF3 0.038 Rap guanine nucleotide exchange factor 3 isoform b [... RAPGEF3 0.038 Rap guanine nucleotide exchange factor 3 isoform a ... RAPGEFL1 0.038 Rap guanine nucleotide exchange factor (GEF)-like 1 [... RAPGEF1 0.023 guanine nucleotide-releasing factor 2 isoform b [Hom... RAPGEF1 0.023 guanine nucleotide-releasing factor 2 isoform a [Hom... RASGEF1C 0.022 RasGEF domain family, member 1C RASGEF1A 0.022 RasGEF domain family, member 1A RASGRF2 0.021 Ras protein-specific guanine nucleotide-releasing fa... RASGEF1B 0.021 RasGEF domain family, member 1B RASGRF1 0.020 Ras protein-specific guanine nucleotide-releasing f... RASGRF1 0.020 Ras protein-specific guanine nucleotide-releasing fa... RASGRF1 0.020 Ras protein-specific guanine nucleotide-releasing fa... SOS1 0.019 son of sevenless homolog 1 SOS2 0.017 son of sevenless homolog 2 RALGPS2 0.017 Ral GEF with PH domain and SH3 binding motif 2 [Homo... DFNB31 0.017 CASK-interacting protein CIP98 isoform 1 RASGRP1 0.016 RAS guanyl releasing protein 1 isoform b RASGRP1 0.016 RAS guanyl releasing protein 1 isoform a RGL1 0.016 ral guanine nucleotide dissociation stimulator-like ... RALGPS1 0.016 Ral GEF with PH domain and SH3 binding motif 1 RALGDS 0.016 ral guanine nucleotide dissociation stimulator isofo... RALGDS 0.016 ral guanine nucleotide dissociation stimulator isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.