DFNB31 3678

Name: DFNB31	Sequence: fasta or formatted (524aa)		NCBI GI: 140561027
Description: CASK-interacting protein CIP98 isoform 2		Referenced in: Auditory and Vestibular Functions PDZ Domain
Other entries for this name: alt prot [907aa] CASK-interacting protein CIP98 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 42 2 C cysteine 0.6 3 1 D aspartate 4.6 24 2 E glutamate 5.9 31 2 F phenylalanine 2.3 12 1 G glycine 8.8 46 2 H histidine 2.9 15 1 I isoleucine 2.7 14 2 K lysine 3.4 18 2 L leucine 9.7 51 2 M methionine 1.5 8 1 N asparagine 3.8 20 1 P proline 9.2 48 3 Q glutamine 4.4 23 1 R arginine 6.1 32 2 S serine 11.3 59 2 T threonine 7.1 37 2 V valine 6.3 33 1 W tryptophan 0.0 0 0 Y tyrosine 1.5 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CASK-interacting protein CIP98 isoform 2 DFNB31 1.000 CASK-interacting protein CIP98 isoform 1 MPDZ 0.026 multiple PDZ domain protein MUC7 0.025 mucin 7, secreted precursor MUC7 0.025 mucin 7, secreted precursor MUC7 0.025 mucin 7, secreted precursor GOPC 0.025 golgi associated PDZ and coiled-coil motif containing... GOPC 0.025 golgi associated PDZ and coiled-coil motif containin... KIAA0754 0.024 hypothetical protein LOC643314 SRCAP 0.024 Snf2-related CBP activator protein SNTB2 0.024 basic beta 2 syntrophin INADL 0.024 InaD-like PDZD2 0.024 PDZ domain containing 2 PPP1R9B 0.022 protein phosphatase 1, regulatory subunit 9B IL16 0.021 interleukin 16 isoform 2 IL16 0.021 interleukin 16 isoform 1 precursor GRIP1 0.021 glutamate receptor interacting protein 1 TSC22D2 0.021 TSC22 domain family, member 2 GLTSCR1 0.021 glioma tumor suppressor candidate region gene 1 [Ho... SNTB1 0.021 basic beta 1 syntrophin LNX2 0.020 ligand of numb-protein X 2 VASP 0.020 vasodilator-stimulated phosphoprotein MAGI1 0.020 membrane associated guanylate kinase, WW and PDZ dom... FRMPD2 0.020 FERM and PDZ domain containing 2 isoform 1 FRMPD2 0.020 FERM and PDZ domain containing 2 isoform 3 MAGED4B 0.019 melanoma antigen family D, 4B isoform 2 MAGED4B 0.019 melanoma antigen family D, 4B isoform 1 MAGED4B 0.019 melanoma antigen family D, 4B isoform 1 MAGED4 0.019 melanoma antigen family D, 4 PTPN13 0.019 protein tyrosine phosphatase, non-receptor type 13 i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.