Guide to the Human Genome
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Name: DUT Sequence: fasta or formatted (252aa) NCBI GI: 70906441
Description:

deoxyuridine triphosphatase isoform 1 precursor

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt prot [164aa] deoxyuridine triphosphatase isoform 2
alt prot [141aa] deoxyuridine triphosphatase isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.1         33           2
 C cysteine            2.0          5           1
 D aspartate           3.6          9           2
 E glutamate           5.6         14           2
 F phenylalanine       3.2          8           1
 G glycine            12.7         32           2
 H histidine           1.6          4           1
 I isoleucine          4.4         11           1
 K lysine              4.4         11           2
 L leucine             7.1         18           2
 M methionine          1.6          4           1
 N asparagine          1.6          4           1
 P proline             8.3         21           2
 Q glutamine           3.2          8           1
 R arginine            8.3         21           1
 S serine              6.7         17           2
 T threonine           4.0         10           1
 V valine              5.2         13           2
 W tryptophan          0.4          1           1
 Y tyrosine            3.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   deoxyuridine triphosphatase isoform 1 precursor [Hom... 
DUT                   0.609   deoxyuridine triphosphatase isoform 2 
DUT                   0.537   deoxyuridine triphosphatase isoform 3 
COL1A1                0.029   alpha 1 type I collagen preproprotein 
COL5A1                0.027   alpha 1 type V collagen preproprotein 
COL3A1                0.025   collagen type III alpha 1 preproprotein 
MARCH4                0.025   membrane-associated ring finger (C3HC4) 4 
MYCN                  0.025   v-myc myelocytomatosis viral related oncogene, neuro...
COL25A1               0.025   collagen, type XXV, alpha 1 isoform 1 
COL25A1               0.025   collagen, type XXV, alpha 1 isoform 2 
COL1A2                0.025   alpha 2 type I collagen 
BSN                   0.023   bassoon protein 
COL11A1               0.023   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.023   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.023   alpha 1 type XI collagen isoform A preproprotein [Ho...
LOC100129036          0.023   PREDICTED: hypothetical protein 
LOC100129036          0.023   PREDICTED: hypothetical protein 
FLJ22184              0.023   PREDICTED: hypothetical protein LOC80164 
LOC100129036          0.023   PREDICTED: hypothetical protein 
COL2A1                0.021   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.021   collagen, type II, alpha 1 isoform 2 precursor [Hom...
LOC100288243          0.021   PREDICTED: hypothetical protein 
LOC100288243          0.021   PREDICTED: hypothetical protein XP_002342233 
INSM2                 0.021   insulinoma-associated protein IA-6 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
LOC100291828          0.021   PREDICTED: hypothetical protein XP_002344932 
LOC100131102          0.021   PREDICTED: hypothetical protein 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
LOC100288926          0.021   PREDICTED: hypothetical protein XP_002343509 
COL7A1                0.021   alpha 1 type VII collagen precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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