Guide to the Human Genome
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Name: MARCH4 Sequence: fasta or formatted (410aa) NCBI GI: 57977325
Description:

membrane-associated ring finger (C3HC4) 4

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         27           3
 C cysteine            5.1         21           3
 D aspartate           3.4         14           2
 E glutamate           4.6         19           3
 F phenylalanine       2.2          9           1
 G glycine             7.8         32           2
 H histidine           2.9         12           3
 I isoleucine          4.6         19           2
 K lysine              3.4         14           1
 L leucine            10.2         42           2
 M methionine          2.2          9           1
 N asparagine          2.0          8           2
 P proline            10.2         42           5
 Q glutamine           5.1         21           2
 R arginine            5.6         23           2
 S serine              8.8         36           3
 T threonine           4.1         17           2
 V valine              4.4         18           2
 W tryptophan          3.9         16           4
 Y tyrosine            2.7         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane-associated ring finger (C3HC4) 4 
MARCH9                0.434   membrane-associated RING-CH protein IX 
MARCH11               0.349   membrane-associated ring finger (C3HC4) 11 
MARCH1                0.056   membrane-associated RING-CH protein I 
MARCH8                0.055   cellular modulator of immune recognition isoform 7 [...
MARCH8                0.055   cellular modulator of immune recognition isoform 6 [...
MARCH8                0.055   cellular modulator of immune recognition isoform 8 [...
MARCH3                0.045   membrane-associated ring finger (C3HC4) 3 
MARCH2                0.041   membrane-associated ring finger (C3HC4) 2 isoform 2 ...
MARCH2                0.041   membrane-associated ring finger (C3HC4) 2 isoform 1 ...
MARCH2                0.041   membrane-associated ring finger (C3HC4) 2 isoform 1 ...
MARCH6                0.030   membrane-associated ring finger (C3HC4) 6 
RANBP9                0.023   RAN binding protein 9 
MARCH7                0.022   axotrophin 
MARCH10               0.022   ring finger protein 190 
MARCH10               0.022   ring finger protein 190 
MARCH5                0.021   membrane-associated ring finger (C3HC4) 5 
FMN1                  0.021   formin 1 
HOXD3                 0.021   homeobox D3 
LMTK3                 0.020   lemur tyrosine kinase 3 
ESPN                  0.019   espin 
ORAI1                 0.017   calcium release-activated calcium channel protein 1 ...
FMN2                  0.017   formin 2 
SH3BP1                0.017   SH3-domain binding protein 1 
PGR                   0.017   progesterone receptor 
WASF2                 0.017   WAS protein family, member 2 
SF1                   0.017   splicing factor 1 isoform 2 
SF1                   0.017   splicing factor 1 isoform 1 
ABI3                  0.017   NESH protein isoform 2 
ABI3                  0.017   NESH protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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