Guide to the Human Genome
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Name: MYCN Sequence: fasta or formatted (464aa) NCBI GI: 19923312
Description:

v-myc myelocytomatosis viral related oncogene, neuroblastoma derived

Referenced in:

Myc and Related Functions
Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         53           2
 C cysteine            1.5          7           1
 D aspartate           5.2         24           2
 E glutamate           9.1         42           4
 F phenylalanine       2.6         12           1
 G glycine             7.8         36           2
 H histidine           2.6         12           1
 I isoleucine          2.8         13           1
 K lysine              5.6         26           2
 L leucine             8.0         37           3
 M methionine          1.1          5           1
 N asparagine          2.6         12           1
 P proline            10.8         50           2
 Q glutamine           3.4         16           3
 R arginine            5.6         26           3
 S serine              9.1         42           3
 T threonine           4.3         20           2
 V valine              4.7         22           2
 W tryptophan          0.9          4           1
 Y tyrosine            1.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   v-myc myelocytomatosis viral related oncogene, neuro... 
MYC                   0.246   myc proto-oncogene protein 
MYCL1                 0.136   l-myc-1 proto-oncogene isoform 1 
MYCL1                 0.136   l-myc-1 proto-oncogene isoform 1 
MYCL1                 0.077   l-myc-1 proto-oncogene isoform 2 
MAX                   0.043   MAX protein isoform b 
LOC100293553          0.040   PREDICTED: similar to L-myc-2 protein, partial [Hom...
MAX                   0.039   MAX protein isoform a 
MAX                   0.038   MAX protein isoform e 
MAX                   0.037   MAX protein isoform c 
MLXIPL                0.034   Williams Beuren syndrome chromosome region 14 isofor...
RANBP9                0.033   RAN binding protein 9 
MLXIPL                0.031   Williams Beuren syndrome chromosome region 14 isofor...
TFE3                  0.031   transcription factor E3 
AMOT                  0.029   angiomotin isoform 2 
AMOT                  0.029   angiomotin isoform 1 
FAM48B1               0.029   hypothetical protein LOC100130302 
OGFR                  0.028   opioid growth factor receptor 
SREBF2                0.028   sterol regulatory element-binding transcription fact...
TAF4                  0.027   TBP-associated factor 4 
SETD1A                0.026   SET domain containing 1A 
KRTAP4-6              0.026   PREDICTED: keratin associated protein 4.6 
MNT                   0.026   MAX binding protein 
CDKN1C                0.025   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.025   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.025   cyclin-dependent kinase inhibitor 1C isoform a 
HOXA13                0.025   homeobox A13 
LBXCOR1               0.025   LBXCOR1 homolog 
ARX                   0.025   aristaless related homeobox 
POU4F1                0.024   POU domain, class 4, transcription factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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