Guide to the Human Genome
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Name: WNT2B Sequence: fasta or formatted (372aa) NCBI GI: 13518017
Description:

wingless-type MMTV integration site family, member 2B isoform WNT-2B1

Referenced in:

Wnt Signals

Other entries for this name:
alt prot [391aa] wingless-type MMTV integration site family, member 2B isoform WNT...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         31           2
 C cysteine            7.0         26           2
 D aspartate           6.5         24           1
 E glutamate           3.2         12           1
 F phenylalanine       3.5         13           1
 G glycine             8.6         32           2
 H histidine           3.2         12           2
 I isoleucine          3.5         13           1
 K lysine              4.3         16           2
 L leucine             6.2         23           1
 M methionine          1.6          6           1
 N asparagine          2.7         10           2
 P proline             1.9          7           1
 Q glutamine           4.0         15           1
 R arginine           11.6         43           3
 S serine              5.4         20           2
 T threonine           7.0         26           2
 V valine              7.0         26           2
 W tryptophan          1.6          6           1
 Y tyrosine            3.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wingless-type MMTV integration site family, member 2... 
WNT2B                 0.895   wingless-type MMTV integration site family, member 2...
WNT2                  0.656   wingless-type MMTV integration site family member 2 p...
WNT5A                 0.436   wingless-type MMTV integration site family, member 5...
WNT5B                 0.436   wingless-type MMTV integration site family, member 5...
WNT5B                 0.436   wingless-type MMTV integration site family, member 5...
WNT7B                 0.432   wingless-type MMTV integration site family, member 7...
WNT7A                 0.423   wingless-type MMTV integration site family, member 7...
WNT4                  0.421   wingless-type MMTV integration site family, member 4...
WNT3                  0.389   wingless-type MMTV integration site family, member 3...
WNT3A                 0.370   wingless-type MMTV integration site family, member 3...
WNT16                 0.356   wingless-type MMTV integration site family, member 1...
WNT16                 0.356   wingless-type MMTV integration site family, member 1...
WNT1                  0.355   wingless-type MMTV integration site family, member 1 ...
WNT10A                0.344   wingless-type MMTV integration site family, member 1...
WNT6                  0.335   wingless-type MMTV integration site family, member 6...
WNT10B                0.309   wingless-type MMTV integration site family, member 1...
WNT11                 0.308   wingless-type MMTV integration site family, member 1...
WNT8B                 0.295   wingless-type MMTV integration site family, member ...
WNT8A                 0.291   wingless-type MMTV integration site family, member 8...
WNT9B                 0.285   wingless-type MMTV integration site family, member 9...
WNT9A                 0.271   wingless-type MMTV integration site family, member 9...
LOC100289775          0.205   PREDICTED: hypothetical protein XP_002348164 
LOC100293688          0.017   PREDICTED: similar to hCG2042405 
LOC100290987          0.017   PREDICTED: hypothetical protein XP_002347812 
LOC100288061          0.017   PREDICTED: hypothetical protein XP_002343602 
KRTAP4-11             0.014   keratin associated protein 4-11 
KRTAP4-9              0.013   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-9              0.013   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.013   keratin associated protein 4-9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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