Guide to the Human Genome
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Name: WNT2 Sequence: fasta or formatted (360aa) NCBI GI: 4507927
Description:

wingless-type MMTV integration site family member 2 precursor

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         29           1
 C cysteine            6.7         24           2
 D aspartate           6.1         22           1
 E glutamate           3.3         12           1
 F phenylalanine       3.6         13           1
 G glycine             8.1         29           2
 H histidine           2.8         10           1
 I isoleucine          2.5          9           1
 K lysine              6.1         22           2
 L leucine             6.7         24           3
 M methionine          3.1         11           1
 N asparagine          4.4         16           2
 P proline             2.5          9           1
 Q glutamine           3.1         11           1
 R arginine            8.1         29           1
 S serine              7.2         26           2
 T threonine           5.8         21           2
 V valine              6.4         23           2
 W tryptophan          3.3         12           2
 Y tyrosine            2.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wingless-type MMTV integration site family member 2 p... 
WNT2B                 0.693   wingless-type MMTV integration site family, member 2...
WNT2B                 0.668   wingless-type MMTV integration site family, member 2...
WNT5A                 0.432   wingless-type MMTV integration site family, member 5...
WNT5B                 0.424   wingless-type MMTV integration site family, member 5...
WNT5B                 0.424   wingless-type MMTV integration site family, member 5...
WNT4                  0.417   wingless-type MMTV integration site family, member 4...
WNT7B                 0.407   wingless-type MMTV integration site family, member 7...
WNT3                  0.405   wingless-type MMTV integration site family, member 3...
WNT3A                 0.395   wingless-type MMTV integration site family, member 3...
WNT7A                 0.389   wingless-type MMTV integration site family, member 7...
WNT1                  0.363   wingless-type MMTV integration site family, member 1 ...
WNT16                 0.347   wingless-type MMTV integration site family, member 1...
WNT16                 0.347   wingless-type MMTV integration site family, member 1...
WNT6                  0.337   wingless-type MMTV integration site family, member 6...
WNT10A                0.315   wingless-type MMTV integration site family, member 1...
WNT10B                0.305   wingless-type MMTV integration site family, member 1...
WNT8B                 0.300   wingless-type MMTV integration site family, member ...
WNT11                 0.300   wingless-type MMTV integration site family, member 1...
WNT8A                 0.292   wingless-type MMTV integration site family, member 8...
WNT9B                 0.277   wingless-type MMTV integration site family, member 9...
WNT9A                 0.271   wingless-type MMTV integration site family, member 9...
LOC100289775          0.191   PREDICTED: hypothetical protein XP_002348164 
LOC100293688          0.013   PREDICTED: similar to hCG2042405 
LOC100290987          0.013   PREDICTED: hypothetical protein XP_002347812 
LOC100288061          0.013   PREDICTED: hypothetical protein XP_002343602 
KRTAP4-11             0.008   keratin associated protein 4-11 
ASTN2                 0.008   astrotactin 2 isoform c 
ASTN2                 0.008   astrotactin 2 isoform b 
ASTN2                 0.008   astrotactin 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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