Guide to the Human Genome
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Name: WNT7A Sequence: fasta or formatted (349aa) NCBI GI: 17505191
Description:

wingless-type MMTV integration site family, member 7A precursor

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         27           2
 C cysteine            7.2         25           2
 D aspartate           3.4         12           1
 E glutamate           5.7         20           2
 F phenylalanine       3.2         11           1
 G glycine             9.2         32           2
 H histidine           2.3          8           1
 I isoleucine          4.9         17           2
 K lysine              7.2         25           2
 L leucine             6.3         22           1
 M methionine          2.3          8           1
 N asparagine          4.9         17           2
 P proline             3.2         11           1
 Q glutamine           4.0         14           1
 R arginine            7.2         25           2
 S serine              5.2         18           2
 T threonine           5.4         19           2
 V valine              5.4         19           2
 W tryptophan          1.7          6           1
 Y tyrosine            3.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wingless-type MMTV integration site family, member 7... 
WNT7B                 0.809   wingless-type MMTV integration site family, member 7...
WNT2B                 0.449   wingless-type MMTV integration site family, member 2...
WNT2B                 0.449   wingless-type MMTV integration site family, member 2...
WNT4                  0.442   wingless-type MMTV integration site family, member 4...
WNT5B                 0.427   wingless-type MMTV integration site family, member 5...
WNT5B                 0.427   wingless-type MMTV integration site family, member 5...
WNT5A                 0.423   wingless-type MMTV integration site family, member 5...
WNT3                  0.412   wingless-type MMTV integration site family, member 3...
WNT2                  0.406   wingless-type MMTV integration site family member 2 p...
WNT16                 0.402   wingless-type MMTV integration site family, member 1...
WNT16                 0.402   wingless-type MMTV integration site family, member 1...
WNT3A                 0.401   wingless-type MMTV integration site family, member 3...
LOC100289775          0.380   PREDICTED: hypothetical protein XP_002348164 
WNT1                  0.355   wingless-type MMTV integration site family, member 1 ...
WNT10A                0.352   wingless-type MMTV integration site family, member 1...
WNT6                  0.349   wingless-type MMTV integration site family, member 6...
WNT10B                0.348   wingless-type MMTV integration site family, member 1...
WNT8B                 0.325   wingless-type MMTV integration site family, member ...
WNT11                 0.318   wingless-type MMTV integration site family, member 1...
WNT8A                 0.285   wingless-type MMTV integration site family, member 8...
WNT9B                 0.284   wingless-type MMTV integration site family, member 9...
WNT9A                 0.275   wingless-type MMTV integration site family, member 9...
LOC100293688          0.018   PREDICTED: similar to hCG2042405 
LOC100290987          0.018   PREDICTED: hypothetical protein XP_002347812 
LOC100288061          0.018   PREDICTED: hypothetical protein XP_002343602 
JAG2                  0.007   jagged 2 isoform b precursor 
JAG2                  0.007   jagged 2 isoform a precursor 
TACC3                 0.007   transforming, acidic coiled-coil containing protein 3...
KRTAP5-10             0.004   keratin associated protein 5-10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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