Guide to the Human Genome
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Name: WNT10A Sequence: fasta or formatted (417aa) NCBI GI: 16936520
Description:

wingless-type MMTV integration site family, member 10A precursor

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         38           3
 C cysteine            5.8         24           2
 D aspartate           3.8         16           1
 E glutamate           5.3         22           2
 F phenylalanine       3.8         16           2
 G glycine             7.9         33           2
 H histidine           4.1         17           1
 I isoleucine          2.9         12           1
 K lysine              2.9         12           1
 L leucine             8.9         37           4
 M methionine          1.9          8           1
 N asparagine          3.1         13           2
 P proline             7.9         33           2
 Q glutamine           3.8         16           1
 R arginine           11.3         47           3
 S serine              7.2         30           2
 T threonine           2.9         12           1
 V valine              4.8         20           2
 W tryptophan          1.9          8           1
 Y tyrosine            0.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wingless-type MMTV integration site family, member 1... 
WNT10B                0.571   wingless-type MMTV integration site family, member 1...
WNT2B                 0.305   wingless-type MMTV integration site family, member 2...
WNT2B                 0.305   wingless-type MMTV integration site family, member 2...
WNT3                  0.298   wingless-type MMTV integration site family, member 3...
WNT3A                 0.297   wingless-type MMTV integration site family, member 3...
WNT7A                 0.294   wingless-type MMTV integration site family, member 7...
WNT4                  0.294   wingless-type MMTV integration site family, member 4...
WNT7B                 0.294   wingless-type MMTV integration site family, member 7...
WNT1                  0.290   wingless-type MMTV integration site family, member 1 ...
WNT6                  0.290   wingless-type MMTV integration site family, member 6...
WNT5B                 0.280   wingless-type MMTV integration site family, member 5...
WNT5B                 0.280   wingless-type MMTV integration site family, member 5...
WNT5A                 0.274   wingless-type MMTV integration site family, member 5...
WNT2                  0.274   wingless-type MMTV integration site family member 2 p...
WNT16                 0.244   wingless-type MMTV integration site family, member 1...
WNT16                 0.244   wingless-type MMTV integration site family, member 1...
WNT9A                 0.241   wingless-type MMTV integration site family, member 9...
WNT11                 0.233   wingless-type MMTV integration site family, member 1...
WNT9B                 0.229   wingless-type MMTV integration site family, member 9...
WNT8B                 0.208   wingless-type MMTV integration site family, member ...
WNT8A                 0.202   wingless-type MMTV integration site family, member 8...
LOC100289775          0.130   PREDICTED: hypothetical protein XP_002348164 
LOC100293688          0.017   PREDICTED: similar to hCG2042405 
LOC100290987          0.017   PREDICTED: hypothetical protein XP_002347812 
LOC100288061          0.017   PREDICTED: hypothetical protein XP_002343602 
AIRE                  0.013   autoimmune regulator isoform 1 
AIRE                  0.013   autoimmune regulator isoform 2 
ZNF692                0.012   zinc finger protein 692 isoform 2 
ZNF692                0.012   zinc finger protein 692 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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