Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KRTAP4-9 Sequence: fasta or formatted (195aa) NCBI GI: 239751310
Description:

PREDICTED: keratin associated protein 4-9 isoform 2

Referenced in:

Keratins

Other entries for this name:
alt prot [210aa] keratin associated protein 4-9
alt prot [254aa] PREDICTED: keratin associated protein 4-9
alt prot [210aa] PREDICTED: keratin associated protein 4-9 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.5          1           1
 C cysteine           35.4         69           3
 D aspartate           1.0          2           1
 E glutamate           2.1          4           1
 F phenylalanine       0.0          0           0
 G glycine             2.1          4           1
 H histidine           1.5          3           1
 I isoleucine          1.5          3           1
 K lysine              0.5          1           1
 L leucine             1.0          2           1
 M methionine          0.5          1           1
 N asparagine          0.5          1           1
 P proline             9.7         19           1
 Q glutamine           5.1         10           1
 R arginine            8.7         17           1
 S serine             15.4         30           2
 T threonine           7.7         15           2
 V valine              5.6         11           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: keratin associated protein 4-9 isoform 2... 
KRTAP4-9              0.972   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.970   keratin associated protein 4-9 
KRTAP4-11             0.873   keratin associated protein 4-11 
KRTAP4-8              0.854   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.854   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.852   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.852   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.852   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.830   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.830   keratin associated protein 4.8 
KRTAP4-8              0.824   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.824   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-12             0.824   keratin associated protein 4-12 
KRTAP4-5              0.735   keratin associated protein 4-5 
KRTAP4-7              0.677   keratin associated protein 4-7 
KRTAP4-7              0.677   PREDICTED: keratin associated protein 4-7 
KRTAP4-3              0.669   keratin associated protein 4-3 
KRTAP4-4              0.628   keratin associated protein 4.4 
KRTAP4-2              0.469   keratin associated protein 4-2 
LOC728318             0.432   PREDICTED: hypothetical protein 
LOC728318             0.432   PREDICTED: hypothetical protein 
LOC728318             0.432   PREDICTED: hypothetical protein 
KRTAP4-1              0.398   keratin associated protein 4-1 
KRTAP10-11            0.391   keratin associated protein 10-11 
LOC728341             0.385   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP9-2              0.381   keratin associated protein 9.2 
KRTAP10-5             0.376   keratin associated protein 10-5 
KRTAP10-9             0.374   keratin associated protein 10-9 
KRTAP10-1             0.368   keratin associated protein 10-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press