Guide to the Human Genome
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Name: KRTAP4-9 Sequence: fasta or formatted (210aa) NCBI GI: 239751308
Description:

PREDICTED: keratin associated protein 4-9 isoform 1

Referenced in:

Keratins

Other entries for this name:
alt prot [210aa] keratin associated protein 4-9
alt prot [254aa] PREDICTED: keratin associated protein 4-9
alt prot [195aa] PREDICTED: keratin associated protein 4-9 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.5          1           1
 C cysteine           35.2         74           3
 D aspartate           1.0          2           1
 E glutamate           1.9          4           1
 F phenylalanine       0.0          0           0
 G glycine             1.9          4           1
 H histidine           1.0          2           1
 I isoleucine          1.4          3           1
 K lysine              0.5          1           1
 L leucine             1.0          2           1
 M methionine          0.5          1           1
 N asparagine          0.5          1           1
 P proline            10.0         21           1
 Q glutamine           6.2         13           1
 R arginine            8.6         18           1
 S serine             15.7         33           2
 T threonine           7.6         16           2
 V valine              5.7         12           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: keratin associated protein 4-9 isoform 1... 
KRTAP4-9              0.996   keratin associated protein 4-9 
KRTAP4-9              0.862   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-12             0.858   keratin associated protein 4-12 
KRTAP4-8              0.836   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.836   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.810   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.792   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.792   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.786   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.786   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.750   keratin associated protein 4-11 
KRTAP4-8              0.649   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.649   keratin associated protein 4.8 
KRTAP4-5              0.645   keratin associated protein 4-5 
KRTAP4-3              0.627   keratin associated protein 4-3 
KRTAP4-7              0.615   keratin associated protein 4-7 
KRTAP4-7              0.615   PREDICTED: keratin associated protein 4-7 
KRTAP4-4              0.545   keratin associated protein 4.4 
KRTAP4-2              0.511   keratin associated protein 4-2 
LOC728318             0.413   PREDICTED: hypothetical protein 
LOC728318             0.413   PREDICTED: hypothetical protein 
LOC728318             0.411   PREDICTED: hypothetical protein 
KRTAP10-11            0.393   keratin associated protein 10-11 
KRTAP4-1              0.389   keratin associated protein 4-1 
KRTAP10-5             0.379   keratin associated protein 10-5 
KRTAP10-1             0.379   keratin associated protein 10-1 
LOC100131696          0.377   PREDICTED: keratin associated protein 
LOC100131696          0.377   PREDICTED: keratin associated protein 
LOC100288060          0.377   PREDICTED: hypothetical protein XP_002343557 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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